Project name: query_structure

Status: done

Started: 2026-03-16 23:28:31
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Chain sequence(s) A: GSARDDSLVGDAGANVLNGLAGNDLLLGGAGDDVLLGDEGSDVLDGDAGNDDLFGGQGDDRYVFGVGYGHDTIYESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:58)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:58)
Show buried residues

Minimal score value
-3.2471
Maximal score value
1.6227
Average score
-0.9685
Total score value
-147.2076

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.8787
2 S A -1.0806
3 A A -1.5648
4 R A -3.0460
5 D A -3.2471
6 D A -1.7038
7 S A -0.2156
8 L A 0.9045
9 V A 1.6177
10 G A 0.3770
11 D A -1.4659
12 A A -1.2309
13 G A -1.0616
14 A A -0.8504
15 N A 0.2754
16 V A 1.6227
17 L A 1.5069
18 N A 0.4944
19 G A 0.0000
20 L A -0.5825
21 A A -1.7918
22 G A -2.5464
23 N A -2.7316
24 D A 0.0000
25 L A 0.3191
26 L A 0.0000
27 L A 0.9219
28 G A 0.0000
29 G A -0.7936
30 A A -1.3507
31 G A -1.7922
32 D A -2.4017
33 D A 0.0000
34 V A 0.5599
35 L A 0.0000
36 L A 0.7071
37 G A 0.0000
38 D A -1.3180
39 E A -2.6297
40 G A -2.5299
41 S A -2.2791
42 D A 0.0000
43 V A 0.0326
44 L A 0.0000
45 D A -0.2057
46 G A 0.0000
47 D A -1.1967
48 A A -1.0771
49 G A -1.9458
50 N A -2.4595
51 D A 0.0000
52 D A -0.5574
53 L A 0.0000
54 F A 0.4687
55 G A 0.0000
56 G A -1.3074
57 Q A -2.5765
58 G A -2.6644
59 D A -2.8916
60 D A 0.0000
61 R A -1.5838
62 Y A 0.0000
63 V A 0.0000
64 F A 0.0000
65 G A 0.0000
66 V A 1.0202
67 G A -0.1310
68 Y A -0.6285
69 G A -1.4255
70 H A -1.8953
71 D A 0.0000
72 T A -0.5255
73 I A 0.0000
74 Y A 0.2068
75 E A 0.0000
76 S A -1.1307
77 G A -1.8267
78 G A -1.9571
79 G A -2.1637
80 H A -2.0552
81 D A 0.0000
82 T A 0.0000
83 I A 0.0000
84 R A -2.2497
85 I A 0.0000
86 N A -1.0388
87 A A 0.0000
88 G A -1.6293
89 A A -1.7567
90 D A -2.1706
91 Q A -1.7662
92 L A 0.0000
93 W A -0.2581
94 F A 0.0000
95 A A -1.6245
96 R A -2.8528
97 Q A -2.4265
98 G A -2.1314
99 N A -2.5588
100 D A -2.2184
101 L A 0.0000
102 E A -1.3177
103 I A 0.0000
104 R A -0.7482
105 I A 0.0000
106 L A -0.1254
107 G A -0.4459
108 T A -0.7628
109 D A -1.7864
110 D A 0.0000
111 A A -0.8194
112 L A 0.0000
113 T A -0.7909
114 V A 0.0000
115 H A -1.0628
116 D A 0.0000
117 W A 0.0000
118 Y A -2.1810
119 R A -3.0268
120 D A -2.6921
121 A A -1.9991
122 D A -2.8031
123 H A -2.1525
124 R A -1.9202
125 V A 0.0000
126 E A -1.7365
127 I A -1.5528
128 I A 0.0000
129 H A -1.7344
130 A A 0.0000
131 A A -1.5093
132 N A -2.0742
133 Q A -1.9930
134 A A -1.4392
135 V A 0.0000
136 D A -2.5381
137 Q A -2.3586
138 A A -1.7593
139 G A -1.9306
140 I A 0.0000
141 E A -2.9774
142 K A -2.7728
143 L A -1.3510
144 V A 0.0000
145 E A -2.8129
146 A A -1.3696
147 M A -0.9620
148 A A -1.2324
149 Q A -1.1196
150 Y A 0.0202
151 P A -0.7417
152 D A -1.6835
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Laboratory of Theory of Biopolymers 2018