| Chain sequence(s) |
A: SKECMTDGTVCYIHNHNDCCGSCLCSNGPIARPWEMMVGNCMCGPKA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.4257 | |
| 2 | K | A | -2.5786 | |
| 3 | E | A | -2.6642 | |
| 4 | C | A | -1.2246 | |
| 5 | M | A | -0.4286 | |
| 6 | T | A | -0.5833 | |
| 7 | D | A | -1.5478 | |
| 8 | G | A | -0.9757 | |
| 9 | T | A | -0.1134 | |
| 10 | V | A | 0.8369 | |
| 11 | C | A | 0.0000 | |
| 12 | Y | A | 0.7226 | |
| 13 | I | A | 0.9894 | |
| 14 | H | A | -0.7203 | |
| 15 | N | A | -1.7191 | |
| 16 | H | A | -1.9178 | |
| 17 | N | A | -1.4469 | |
| 18 | D | A | -2.0060 | |
| 19 | C | A | -0.8895 | |
| 20 | C | A | -0.7611 | |
| 21 | G | A | -0.7526 | |
| 22 | S | A | -0.4924 | |
| 23 | C | A | 0.8958 | |
| 24 | L | A | 1.3499 | |
| 25 | C | A | 0.9834 | |
| 26 | S | A | -0.2613 | |
| 27 | N | A | -1.0652 | |
| 28 | G | A | -0.4265 | |
| 29 | P | A | -0.0755 | |
| 30 | I | A | 1.0736 | |
| 31 | A | A | 0.0335 | |
| 32 | R | A | -1.0297 | |
| 33 | P | A | 0.2855 | |
| 34 | W | A | 0.3674 | |
| 35 | E | A | -0.9744 | |
| 36 | M | A | 0.7190 | |
| 37 | M | A | 1.1410 | |
| 38 | V | A | 0.3256 | |
| 39 | G | A | -0.1846 | |
| 40 | N | A | 0.0736 | |
| 41 | C | A | 1.1615 | |
| 42 | M | A | 0.8652 | |
| 43 | C | A | 0.0000 | |
| 44 | G | A | 0.0000 | |
| 45 | P | A | -1.2818 | |
| 46 | K | A | -1.5830 | |
| 47 | A | A | -0.8598 |