Project name: query_structure

Status: done

Started: 2026-03-17 01:02:44
Settings
Chain sequence(s) A: SKECMTDGTVCYIHNHNDCCGSCLCSNGPIARPWEMMVGNCMCGPKA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-2.6642
Maximal score value
1.3499
Average score
-0.3865
Total score value
-18.1655

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -1.4257
2 K A -2.5786
3 E A -2.6642
4 C A -1.2246
5 M A -0.4286
6 T A -0.5833
7 D A -1.5478
8 G A -0.9757
9 T A -0.1134
10 V A 0.8369
11 C A 0.0000
12 Y A 0.7226
13 I A 0.9894
14 H A -0.7203
15 N A -1.7191
16 H A -1.9178
17 N A -1.4469
18 D A -2.0060
19 C A -0.8895
20 C A -0.7611
21 G A -0.7526
22 S A -0.4924
23 C A 0.8958
24 L A 1.3499
25 C A 0.9834
26 S A -0.2613
27 N A -1.0652
28 G A -0.4265
29 P A -0.0755
30 I A 1.0736
31 A A 0.0335
32 R A -1.0297
33 P A 0.2855
34 W A 0.3674
35 E A -0.9744
36 M A 0.7190
37 M A 1.1410
38 V A 0.3256
39 G A -0.1846
40 N A 0.0736
41 C A 1.1615
42 M A 0.8652
43 C A 0.0000
44 G A 0.0000
45 P A -1.2818
46 K A -1.5830
47 A A -0.8598
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Laboratory of Theory of Biopolymers 2018