| Chain sequence(s) |
A: GSVIKCGESCLLGKCYTPGCTCSRPICKKN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.3348 | |
| 2 | S | A | -0.4910 | |
| 3 | V | A | 0.3204 | |
| 4 | I | A | 1.0212 | |
| 5 | K | A | -1.2462 | |
| 6 | C | A | 0.0000 | |
| 7 | G | A | -0.3773 | |
| 8 | E | A | -0.2342 | |
| 9 | S | A | -0.0266 | |
| 10 | C | A | 0.0000 | |
| 11 | L | A | 1.3758 | |
| 12 | L | A | 1.4784 | |
| 13 | G | A | -0.0803 | |
| 14 | K | A | -0.8541 | |
| 15 | C | A | 0.0299 | |
| 16 | Y | A | 0.7927 | |
| 17 | T | A | -0.2490 | |
| 18 | P | A | -0.1965 | |
| 19 | G | A | -1.0891 | |
| 20 | C | A | -1.1840 | |
| 21 | T | A | -0.9214 | |
| 22 | C | A | -0.3578 | |
| 23 | S | A | -0.9013 | |
| 24 | R | A | -1.4052 | |
| 25 | P | A | -0.5555 | |
| 26 | I | A | -0.1622 | |
| 27 | C | A | 0.0000 | |
| 28 | K | A | -1.3873 | |
| 29 | K | A | -1.7743 | |
| 30 | N | A | -2.1545 |