Project name: query_structure

Status: done

Started: 2025-11-29 10:09:23
Settings
Chain sequence(s) A: GSVIKCGESCLLGKCYTPGCTCSRPICKKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:31)
Show buried residues

Minimal score value
-2.1545
Maximal score value
1.4784
Average score
-0.3988
Total score value
-11.9642

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.3348
2 S A -0.4910
3 V A 0.3204
4 I A 1.0212
5 K A -1.2462
6 C A 0.0000
7 G A -0.3773
8 E A -0.2342
9 S A -0.0266
10 C A 0.0000
11 L A 1.3758
12 L A 1.4784
13 G A -0.0803
14 K A -0.8541
15 C A 0.0299
16 Y A 0.7927
17 T A -0.2490
18 P A -0.1965
19 G A -1.0891
20 C A -1.1840
21 T A -0.9214
22 C A -0.3578
23 S A -0.9013
24 R A -1.4052
25 P A -0.5555
26 I A -0.1622
27 C A 0.0000
28 K A -1.3873
29 K A -1.7743
30 N A -2.1545
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Laboratory of Theory of Biopolymers 2018