| Chain sequence(s) |
A: SANSNPALAPRERKAGCKNFFWKTYTSC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.5382 | |
| 2 | A | A | -0.8870 | |
| 3 | N | A | -1.8071 | |
| 4 | S | A | -1.2300 | |
| 5 | N | A | -1.5537 | |
| 6 | P | A | -0.4432 | |
| 7 | A | A | 0.1932 | |
| 8 | L | A | 0.8269 | |
| 9 | A | A | -0.4566 | |
| 10 | P | A | -1.4695 | |
| 11 | R | A | -3.3964 | |
| 12 | E | A | -4.2106 | |
| 13 | R | A | -4.1952 | |
| 14 | K | A | -3.3342 | |
| 15 | A | A | -1.9063 | |
| 16 | G | A | -1.4447 | |
| 17 | C | A | -0.7051 | |
| 18 | K | A | -1.1664 | |
| 19 | N | A | -0.4683 | |
| 20 | F | A | 1.9256 | |
| 21 | F | A | 2.3872 | |
| 22 | W | A | 1.5767 | |
| 23 | K | A | -0.2915 | |
| 24 | T | A | 0.3003 | |
| 25 | Y | A | 1.1270 | |
| 26 | T | A | 0.3742 | |
| 27 | S | A | 0.3314 | |
| 28 | C | A | 0.4237 |