| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGTGYSNPMGWFRQAPGKGRELVAAIEGSSTYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAYAHKLPSRISFDKFFEAAAKDPSVFAFWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:04)
[INFO] Main: Simulation completed successfully. (00:02:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1448 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.4799 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.5179 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.6945 | |
| 8 | G | A | -0.9754 | |
| 9 | G | A | -0.7998 | |
| 10 | G | A | -0.0996 | |
| 11 | L | A | 0.8639 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4545 | |
| 14 | P | A | -1.6480 | |
| 15 | G | A | -1.3993 | |
| 16 | G | A | -0.9477 | |
| 17 | S | A | -1.1332 | |
| 18 | L | A | -0.9775 | |
| 19 | R | A | -2.2680 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5059 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2548 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0662 | |
| 26 | G | A | -1.2238 | |
| 27 | T | A | -0.8463 | |
| 28 | G | A | -0.9595 | |
| 29 | Y | A | -0.7093 | |
| 30 | S | A | -0.9964 | |
| 31 | N | A | 0.0000 | |
| 32 | P | A | 0.0000 | |
| 33 | M | A | 0.0000 | |
| 34 | G | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | 0.0000 | |
| 37 | R | A | 0.0000 | |
| 38 | Q | A | -1.5715 | |
| 39 | A | A | -1.5593 | |
| 40 | P | A | -1.1769 | |
| 41 | G | A | -1.6446 | |
| 42 | K | A | -2.6287 | |
| 43 | G | A | -2.2852 | |
| 44 | R | A | -2.2507 | |
| 45 | E | A | -2.1055 | |
| 46 | L | A | 0.0000 | |
| 47 | V | A | 0.0000 | |
| 48 | A | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | I | A | 0.0000 | |
| 51 | E | A | -0.9611 | |
| 52 | G | A | -0.9362 | |
| 53 | S | A | -0.6422 | |
| 54 | S | A | -0.6344 | |
| 55 | T | A | -0.3965 | |
| 56 | Y | A | -0.9772 | |
| 57 | Y | A | -1.2600 | |
| 58 | P | A | -1.6718 | |
| 59 | D | A | -2.5608 | |
| 60 | S | A | -1.8076 | |
| 61 | V | A | 0.0000 | |
| 62 | E | A | -2.7172 | |
| 63 | G | A | -1.8125 | |
| 64 | R | A | -1.5345 | |
| 65 | F | A | 0.0000 | |
| 66 | T | A | -0.9856 | |
| 67 | I | A | 0.0000 | |
| 68 | S | A | -0.6550 | |
| 69 | R | A | -1.4129 | |
| 70 | D | A | -2.0513 | |
| 71 | N | A | -2.3016 | |
| 72 | A | A | -1.7767 | |
| 73 | K | A | -2.6473 | |
| 74 | R | A | -2.2667 | |
| 75 | M | A | -1.2553 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | -0.7341 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -1.6249 | |
| 80 | M | A | 0.0000 | |
| 81 | N | A | -1.3512 | |
| 82 | S | A | -1.1304 | |
| 83 | L | A | 0.0000 | |
| 84 | R | A | -2.2629 | |
| 85 | A | A | -1.7323 | |
| 86 | E | A | -2.2300 | |
| 87 | D | A | 0.0000 | |
| 88 | T | A | -0.8626 | |
| 89 | A | A | 0.0000 | |
| 90 | V | A | -0.4130 | |
| 91 | Y | A | 0.0000 | |
| 92 | Y | A | -0.2501 | |
| 93 | C | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | Y | A | -0.2262 | |
| 97 | A | A | -0.7556 | |
| 98 | H | A | -1.7315 | |
| 99 | K | A | -2.2654 | |
| 100 | L | A | -1.3555 | |
| 101 | P | A | -1.2896 | |
| 102 | S | A | -1.2843 | |
| 103 | R | A | -1.8644 | |
| 104 | I | A | -1.3652 | |
| 105 | S | A | -1.6639 | |
| 106 | F | A | -1.6937 | |
| 107 | D | A | -2.7870 | |
| 108 | K | A | -2.8728 | |
| 109 | F | A | 0.0000 | |
| 110 | F | A | 0.0000 | |
| 111 | E | A | -2.8841 | |
| 112 | A | A | -2.0558 | |
| 113 | A | A | 0.0000 | |
| 114 | A | A | -2.0547 | |
| 115 | K | A | -2.7551 | |
| 116 | D | A | -2.2069 | |
| 117 | P | A | -1.2349 | |
| 118 | S | A | -0.4900 | |
| 119 | V | A | 0.0613 | |
| 120 | F | A | 0.0000 | |
| 121 | A | A | 0.0887 | |
| 122 | F | A | 0.0111 | |
| 123 | W | A | 0.1123 | |
| 124 | G | A | -0.2909 | |
| 125 | Q | A | -0.9646 | |
| 126 | G | A | -0.5851 | |
| 127 | T | A | 0.0000 | |
| 128 | Q | A | -0.9887 | |
| 129 | V | A | 0.0000 | |
| 130 | T | A | -0.3798 | |
| 131 | V | A | 0.0000 | |
| 132 | S | A | -0.8080 | |
| 133 | S | A | -0.5348 |