| Chain sequence(s) |
A: FEKGHFEF
C: FEKGHFEF B: FEKGHFEF E: FEKGHFEF D: FEKGHFEF G: FEKGHFEF F: FEKGHFEF I: FEKGHFEF H: FEKGHFEF K: FEKGHFEF J: FEKGHFEF M: FEKGHFEF L: FEKGHFEF O: FEKGHFEF N: FEKGHFEF Q: FEKGHFEF P: FEKGHFEF S: FEKGHFEF R: FEKGHFEF T: FEKGHFEF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:15:29)
[INFO] Main: Simulation completed successfully. (00:15:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -0.1691 | |
| 2 | E | A | -2.8215 | |
| 3 | K | A | -3.2325 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | -1.9661 | |
| 6 | F | A | -0.2046 | |
| 7 | E | A | -0.2946 | |
| 8 | F | A | 1.5125 | |
| 1 | F | B | 0.0477 | |
| 2 | E | B | -2.6854 | |
| 3 | K | B | -3.8449 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | -1.8790 | |
| 6 | F | B | 0.0000 | |
| 7 | E | B | 0.0000 | |
| 8 | F | B | 1.8795 | |
| 1 | F | C | -1.2831 | |
| 2 | E | C | -3.2562 | |
| 3 | K | C | -3.6222 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | -2.4596 | |
| 6 | F | C | 0.0000 | |
| 7 | E | C | -0.8398 | |
| 8 | F | C | 1.2850 | |
| 1 | F | D | -1.8297 | |
| 2 | E | D | -3.7639 | |
| 3 | K | D | -3.6458 | |
| 4 | G | D | -2.9055 | |
| 5 | H | D | -2.4626 | |
| 6 | F | D | 0.0000 | |
| 7 | E | D | -1.5046 | |
| 8 | F | D | 0.3166 | |
| 1 | F | E | 0.0000 | |
| 2 | E | E | -4.0069 | |
| 3 | K | E | -3.9966 | |
| 4 | G | E | -3.1326 | |
| 5 | H | E | -2.7689 | |
| 6 | F | E | 0.0000 | |
| 7 | E | E | -1.8227 | |
| 8 | F | E | -0.4361 | |
| 1 | F | F | -1.8555 | |
| 2 | E | F | -3.8087 | |
| 3 | K | F | -4.1438 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | -2.7213 | |
| 6 | F | F | 0.0000 | |
| 7 | E | F | -1.1115 | |
| 8 | F | F | 0.1288 | |
| 1 | F | G | -0.9956 | |
| 2 | E | G | -3.3697 | |
| 3 | K | G | -3.7850 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | -1.9743 | |
| 6 | F | G | 0.0000 | |
| 7 | E | G | -0.7176 | |
| 8 | F | G | 0.5554 | |
| 1 | F | H | -0.6236 | |
| 2 | E | H | -2.4752 | |
| 3 | K | H | -3.1884 | |
| 4 | G | H | 0.0000 | |
| 5 | H | H | -2.2146 | |
| 6 | F | H | 0.0000 | |
| 7 | E | H | -0.4405 | |
| 8 | F | H | 0.8861 | |
| 1 | F | I | -0.4583 | |
| 2 | E | I | -2.1316 | |
| 3 | K | I | -3.0266 | |
| 4 | G | I | 0.0000 | |
| 5 | H | I | -1.7878 | |
| 6 | F | I | 0.0000 | |
| 7 | E | I | 0.0000 | |
| 8 | F | I | 1.1766 | |
| 1 | F | J | -0.1911 | |
| 2 | E | J | -2.0435 | |
| 3 | K | J | -2.8090 | |
| 4 | G | J | 0.0000 | |
| 5 | H | J | -1.4309 | |
| 6 | F | J | 0.0000 | |
| 7 | E | J | -0.0231 | |
| 8 | F | J | 1.1584 | |
| 1 | F | K | 0.0343 | |
| 2 | E | K | -1.6846 | |
| 3 | K | K | -2.7186 | |
| 4 | G | K | 0.0000 | |
| 5 | H | K | -1.5431 | |
| 6 | F | K | 0.0000 | |
| 7 | E | K | 0.0000 | |
| 8 | F | K | 1.4402 | |
| 1 | F | L | -0.2607 | |
| 2 | E | L | -2.4198 | |
| 3 | K | L | -3.3383 | |
| 4 | G | L | 0.0000 | |
| 5 | H | L | -2.0849 | |
| 6 | F | L | 0.0000 | |
| 7 | E | L | -0.2668 | |
| 8 | F | L | 1.0745 | |
| 1 | F | M | -0.2199 | |
| 2 | E | M | -2.6406 | |
| 3 | K | M | -3.3406 | |
| 4 | G | M | 0.0000 | |
| 5 | H | M | -1.6814 | |
| 6 | F | M | -0.2878 | |
| 7 | E | M | -0.3760 | |
| 8 | F | M | 1.1765 | |
| 1 | F | N | -1.6822 | |
| 2 | E | N | -3.3117 | |
| 3 | K | N | -3.4299 | |
| 4 | G | N | -2.5177 | |
| 5 | H | N | -1.8247 | |
| 6 | F | N | 0.0000 | |
| 7 | E | N | -0.4585 | |
| 8 | F | N | 0.7121 | |
| 1 | F | O | -1.3612 | |
| 2 | E | O | -3.2605 | |
| 3 | K | O | -3.5738 | |
| 4 | G | O | -2.3724 | |
| 5 | H | O | -1.9071 | |
| 6 | F | O | 0.0000 | |
| 7 | E | O | -0.5323 | |
| 8 | F | O | 0.8077 | |
| 1 | F | P | -1.5166 | |
| 2 | E | P | -3.3274 | |
| 3 | K | P | -3.7346 | |
| 4 | G | P | 0.0000 | |
| 5 | H | P | -2.2357 | |
| 6 | F | P | -0.9792 | |
| 7 | E | P | -0.5686 | |
| 8 | F | P | 0.7667 | |
| 1 | F | Q | -1.8088 | |
| 2 | E | Q | -3.0565 | |
| 3 | K | Q | -3.1880 | |
| 4 | G | Q | -2.5410 | |
| 5 | H | Q | -2.0457 | |
| 6 | F | Q | 0.0000 | |
| 7 | E | Q | -1.1312 | |
| 8 | F | Q | 0.6947 | |
| 1 | F | R | -1.1630 | |
| 2 | E | R | -2.4910 | |
| 3 | K | R | -2.8466 | |
| 4 | G | R | -1.8663 | |
| 5 | H | R | -1.9299 | |
| 6 | F | R | 0.0000 | |
| 7 | E | R | -0.5288 | |
| 8 | F | R | 0.0000 | |
| 1 | F | S | -0.3832 | |
| 2 | E | S | -2.0456 | |
| 3 | K | S | -2.8558 | |
| 4 | G | S | 0.0000 | |
| 5 | H | S | -1.3764 | |
| 6 | F | S | 0.0000 | |
| 7 | E | S | 0.1978 | |
| 8 | F | S | 1.4086 | |
| 1 | F | T | 0.1091 | |
| 2 | E | T | -1.6356 | |
| 3 | K | T | -2.5770 | |
| 4 | G | T | 0.0000 | |
| 5 | H | T | -0.8364 | |
| 6 | F | T | 0.8648 | |
| 7 | E | T | 0.0000 | |
| 8 | F | T | 2.3902 |