| Chain sequence(s) |
A: QVQLQESGGGLVQAGGSLRLSCEASGDIESIRAMGWFRQAPGKQREFVGFISIDPRTGETTLNYGDFVKGRFTISRDNAKNTVYLQMSNLKSEDTGVYFCAASHWGTLLLKGIEYWGKGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | Q | A | -1.3341 | |
| 3 | V | A | -0.5150 | |
| 4 | Q | A | -1.5497 | |
| 5 | L | A | 0.0000 | |
| 6 | Q | A | -2.3142 | |
| 7 | E | A | 0.0000 | |
| 8 | S | A | -1.3079 | |
| 9 | G | A | -1.1533 | |
| 10 | G | A | -0.6695 | |
| 11 | G | A | 0.0520 | |
| 12 | L | A | 1.1580 | |
| 13 | V | A | 0.0757 | |
| 14 | Q | A | -1.3336 | |
| 15 | A | A | -1.5829 | |
| 16 | G | A | -1.7100 | |
| 17 | G | A | -1.1231 | |
| 18 | S | A | -1.3392 | |
| 19 | L | A | -0.9210 | |
| 20 | R | A | -2.0607 | |
| 21 | L | A | 0.0000 | |
| 22 | S | A | -1.3028 | |
| 23 | C | A | 0.0000 | |
| 24 | E | A | -2.8351 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -1.3288 | |
| 27 | G | A | -0.7844 | |
| 28 | D | A | -0.3525 | |
| 29 | I | A | 1.4412 | |
| 30 | E | A | 0.0000 | |
| 31 | S | A | 0.5924 | |
| 32 | I | A | 1.3603 | |
| 33 | R | A | 0.4881 | |
| 34 | A | A | 0.0000 | |
| 35 | M | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | F | A | 0.0000 | |
| 39 | R | A | -1.3271 | |
| 40 | Q | A | -2.0308 | |
| 41 | A | A | -1.8850 | |
| 42 | P | A | -1.2856 | |
| 43 | G | A | -1.8218 | |
| 44 | K | A | -3.1407 | |
| 45 | Q | A | -3.0616 | |
| 46 | R | A | -2.6611 | |
| 47 | E | A | -2.5235 | |
| 48 | F | A | -0.8079 | |
| 49 | V | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | F | A | 0.0000 | |
| 52 | I | A | 0.0000 | |
| 53 | S | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | D | A | -1.2955 | |
| 56 | P | A | -1.4721 | |
| 57 | R | A | -2.6009 | |
| 58 | T | A | -1.7850 | |
| 59 | G | A | -1.7603 | |
| 60 | E | A | -2.4128 | |
| 61 | T | A | -1.4627 | |
| 62 | T | A | -0.5572 | |
| 63 | L | A | -0.0283 | |
| 64 | N | A | -0.4807 | |
| 65 | Y | A | -0.4313 | |
| 66 | G | A | -0.7339 | |
| 67 | D | A | -1.4784 | |
| 68 | F | A | 0.4101 | |
| 69 | V | A | 0.0000 | |
| 70 | K | A | -1.7896 | |
| 71 | G | A | -1.3687 | |
| 72 | R | A | -1.2474 | |
| 73 | F | A | 0.0000 | |
| 74 | T | A | -0.7391 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -0.4914 | |
| 77 | R | A | -1.1587 | |
| 78 | D | A | -1.7167 | |
| 79 | N | A | -1.2762 | |
| 80 | A | A | -1.1554 | |
| 81 | K | A | -2.3327 | |
| 82 | N | A | -1.6792 | |
| 83 | T | A | 0.0000 | |
| 84 | V | A | 0.0000 | |
| 85 | Y | A | -0.8599 | |
| 86 | L | A | 0.0000 | |
| 87 | Q | A | -1.2536 | |
| 88 | M | A | 0.0000 | |
| 89 | S | A | -1.4914 | |
| 90 | N | A | -2.0687 | |
| 91 | L | A | 0.0000 | |
| 92 | K | A | -2.4444 | |
| 93 | S | A | -1.8575 | |
| 94 | E | A | -2.0584 | |
| 95 | D | A | 0.0000 | |
| 96 | T | A | -0.8338 | |
| 97 | G | A | 0.0000 | |
| 98 | V | A | -0.4009 | |
| 99 | Y | A | 0.0000 | |
| 100 | F | A | -0.7180 | |
| 101 | C | A | 0.0000 | |
| 102 | A | A | 0.0000 | |
| 103 | A | A | 0.0000 | |
| 104 | S | A | -0.1786 | |
| 105 | H | A | -0.4967 | |
| 106 | W | A | 0.6666 | |
| 107 | G | A | 0.0000 | |
| 108 | T | A | 0.5252 | |
| 109 | L | A | 0.6827 | |
| 110 | L | A | 0.0000 | |
| 111 | L | A | 0.4678 | |
| 112 | K | A | -1.2085 | |
| 113 | G | A | -0.8683 | |
| 114 | I | A | 0.0000 | |
| 115 | E | A | -1.6767 | |
| 116 | Y | A | -0.2817 | |
| 117 | W | A | -0.4661 | |
| 118 | G | A | -1.2450 | |
| 119 | K | A | -1.9276 | |
| 120 | G | A | -1.2157 | |
| 121 | T | A | -1.0089 | |
| 122 | Q | A | -0.6706 | |
| 123 | V | A | 0.0000 | |
| 124 | T | A | -0.1576 | |
| 125 | V | A | 0.0000 | |
| 126 | S | A | -0.7066 | |
| 127 | S | A | -0.7906 |