| Chain sequence(s) |
B: SAELKEMAERMEKAIEIAERFAKEYPELKEHLEKMKKKYEELRDRILKTM
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:45)
[INFO] Main: Simulation completed successfully. (00:02:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.8928 | |
| 2 | A | B | -1.5231 | |
| 3 | E | B | -2.7083 | |
| 4 | L | B | -1.9758 | |
| 5 | K | B | -2.8782 | |
| 6 | E | B | -3.6335 | |
| 7 | M | B | -2.5656 | |
| 8 | A | B | 0.0000 | |
| 9 | E | B | -4.5615 | |
| 10 | R | B | -4.2062 | |
| 11 | M | B | -3.3311 | |
| 12 | E | B | -3.8314 | |
| 13 | K | B | -3.5094 | |
| 14 | A | B | -2.1769 | |
| 15 | I | B | 0.0000 | |
| 16 | E | B | -2.2417 | |
| 17 | I | B | -0.5485 | |
| 18 | A | B | 0.0000 | |
| 19 | E | B | -2.5070 | |
| 20 | R | B | -2.6034 | |
| 21 | F | B | -1.2466 | |
| 22 | A | B | 0.0000 | |
| 23 | K | B | -3.2163 | |
| 24 | E | B | -2.9986 | |
| 25 | Y | B | -1.8182 | |
| 26 | P | B | -2.3248 | |
| 27 | E | B | -2.6979 | |
| 28 | L | B | -2.4024 | |
| 29 | K | B | -3.7812 | |
| 30 | E | B | -3.8371 | |
| 31 | H | B | -3.2000 | |
| 32 | L | B | 0.0000 | |
| 33 | E | B | -3.8768 | |
| 34 | K | B | -4.1053 | |
| 35 | M | B | -3.1047 | |
| 36 | K | B | -3.5497 | |
| 37 | K | B | -4.0942 | |
| 38 | K | B | -3.8200 | |
| 39 | Y | B | -3.2805 | |
| 40 | E | B | -3.8597 | |
| 41 | E | B | -3.9443 | |
| 42 | L | B | -2.5784 | |
| 43 | R | B | -3.4125 | |
| 44 | D | B | -3.2506 | |
| 45 | R | B | -3.1478 | |
| 46 | I | B | -1.7915 | |
| 47 | L | B | -1.1300 | |
| 48 | K | B | -2.0148 | |
| 49 | T | B | -0.8545 | |
| 50 | M | B | -0.0207 |