| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAGRWFVEYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAHYWSTWYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.4620 | |
| 2 | S | A | 0.4683 | |
| 3 | S | A | 0.4264 | |
| 4 | V | A | 0.1337 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.2161 | |
| 7 | K | A | -2.2543 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7588 | |
| 10 | V | A | 0.1063 | |
| 11 | V | A | 1.5409 | |
| 12 | A | A | 0.9025 | |
| 13 | A | A | 0.3205 | |
| 14 | T | A | -0.1953 | |
| 15 | P | A | -0.8004 | |
| 16 | T | A | -0.5315 | |
| 17 | S | A | -0.3141 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7470 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.5315 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.5118 | |
| 24 | A | A | -0.4565 | |
| 25 | G | A | -0.1936 | |
| 26 | R | A | -0.9918 | |
| 27 | W | A | 0.6255 | |
| 28 | F | A | 1.8775 | |
| 29 | V | A | 0.0000 | |
| 30 | E | A | 0.0996 | |
| 31 | Y | A | 0.4629 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.3855 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.3027 | |
| 37 | G | A | -0.6933 | |
| 38 | E | A | -1.5025 | |
| 39 | T | A | -1.3605 | |
| 40 | G | A | -1.2963 | |
| 41 | G | A | -1.4820 | |
| 42 | N | A | -1.5875 | |
| 43 | S | A | -0.9075 | |
| 44 | P | A | -0.3363 | |
| 45 | V | A | 0.4371 | |
| 46 | Q | A | -0.7690 | |
| 47 | E | A | -1.5613 | |
| 48 | F | A | -0.5613 | |
| 49 | T | A | -0.0538 | |
| 50 | V | A | 0.2551 | |
| 51 | P | A | 0.1754 | |
| 52 | Y | A | 1.0898 | |
| 53 | S | A | 0.4188 | |
| 54 | S | A | 0.1892 | |
| 55 | S | A | -0.0811 | |
| 56 | T | A | -0.0778 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2564 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4753 | |
| 61 | G | A | -0.6828 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.8554 | |
| 64 | P | A | -1.0028 | |
| 65 | G | A | -1.1223 | |
| 66 | V | A | -1.0237 | |
| 67 | D | A | -2.0290 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8516 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1514 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.2836 | |
| 74 | A | A | 0.0000 | |
| 75 | H | A | 0.5571 | |
| 76 | Y | A | 0.0000 | |
| 77 | W | A | 1.0794 | |
| 78 | S | A | 0.4567 | |
| 79 | T | A | 0.5900 | |
| 80 | W | A | 1.0651 | |
| 81 | Y | A | 0.6953 | |
| 82 | S | A | 0.1972 | |
| 83 | P | A | 0.1499 | |
| 84 | I | A | 0.0805 | |
| 85 | S | A | -0.5234 | |
| 86 | I | A | -0.6983 | |
| 87 | N | A | -1.7756 | |
| 88 | Y | A | -1.5343 | |
| 89 | R | A | -2.4192 | |
| 90 | T | A | -1.2189 |