Chain sequence(s) |
H: QVQLQQSGAVLMKPGASVKISCKATGYSFTNYWIDWIKQRPGHGLEWIGENLPGTRNNYNENFKGKATFTADPSSNTAYIQLNSLTSDDSAVYYCAREALGGDYGLDYWGQGTSLTVSS
L: DVVMTQTPRSLPVSLGDQASMSCRSSQSLKHSNGDTYLHWYLQKPGQSPNLLIYKVSNRFSGVPDRFSGSGSGTEFTFKISRVEAEDLGVYFCSQSTHVPYTFGGGTRLEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11) [INFO] Main: Simulation completed successfully. (00:01:13) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.5922 | |
2 | V | H | 0.0000 | |
3 | Q | H | -1.9304 | |
4 | L | H | 0.0000 | |
5 | Q | H | -2.1472 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.8906 | |
8 | G | H | -0.6713 | |
9 | A | H | 0.3641 | |
11 | V | H | 0.9735 | |
12 | L | H | 1.4055 | |
13 | M | H | -0.0188 | |
14 | K | H | -1.6485 | |
15 | P | H | -1.5077 | |
16 | G | H | -1.1447 | |
17 | A | H | -0.9224 | |
18 | S | H | -0.9720 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.1547 | |
21 | I | H | 0.0000 | |
22 | S | H | -0.6958 | |
23 | C | H | 0.0000 | |
24 | K | H | -1.7129 | |
25 | A | H | 0.0000 | |
26 | T | H | -1.3249 | |
27 | G | H | -1.1259 | |
28 | Y | H | -0.7330 | |
29 | S | H | -0.6206 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.8017 | |
36 | N | H | -1.0272 | |
37 | Y | H | -0.1337 | |
38 | W | H | 0.0000 | |
39 | I | H | 0.0000 | |
40 | D | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | I | H | 0.0000 | |
43 | K | H | 0.0000 | |
44 | Q | H | -0.5695 | |
45 | R | H | -1.1384 | |
46 | P | H | -0.9125 | |
47 | G | H | -1.2083 | |
48 | H | H | -1.5510 | |
49 | G | H | -0.9167 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.6886 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | E | H | 0.0000 | |
56 | N | H | 0.0000 | |
57 | L | H | -0.9055 | |
58 | P | H | -0.9792 | |
59 | G | H | -1.2193 | |
63 | T | H | -1.3567 | |
64 | R | H | -2.2911 | |
65 | N | H | -1.5986 | |
66 | N | H | -1.1114 | |
67 | Y | H | -1.1631 | |
68 | N | H | 0.0000 | |
69 | E | H | -3.0414 | |
70 | N | H | -2.7167 | |
71 | F | H | 0.0000 | |
72 | K | H | -2.8963 | |
74 | G | H | -1.9025 | |
75 | K | H | -1.6566 | |
76 | A | H | 0.0000 | |
77 | T | H | -0.8390 | |
78 | F | H | 0.0000 | |
79 | T | H | -0.5177 | |
80 | A | H | -0.6883 | |
81 | D | H | -0.8707 | |
82 | P | H | -0.7649 | |
83 | S | H | -0.6304 | |
84 | S | H | -0.7565 | |
85 | N | H | -1.0111 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.2220 | |
89 | I | H | 0.0000 | |
90 | Q | H | -0.9162 | |
91 | L | H | 0.0000 | |
92 | N | H | -0.9352 | |
93 | S | H | -0.9139 | |
94 | L | H | 0.0000 | |
95 | T | H | -1.2234 | |
96 | S | H | -1.3641 | |
97 | D | H | -1.8558 | |
98 | D | H | 0.0000 | |
99 | S | H | -0.4715 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.1642 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | E | H | 0.2066 | |
108 | A | H | 0.3968 | |
109 | L | H | 1.1189 | |
110 | G | H | 0.2042 | |
111 | G | H | 0.1639 | |
112 | D | H | 0.1636 | |
113 | Y | H | 0.6392 | |
114 | G | H | 0.0000 | |
115 | L | H | 0.0000 | |
116 | D | H | -0.0492 | |
117 | Y | H | -0.1835 | |
118 | W | H | -0.5303 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.8347 | |
121 | G | H | -0.9315 | |
122 | T | H | 0.0000 | |
123 | S | H | 0.1825 | |
124 | L | H | 0.0000 | |
125 | T | H | 0.1592 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.5933 | |
128 | S | H | -0.7636 | |
1 | D | L | -1.3932 | |
2 | V | L | 0.0000 | |
3 | V | L | 0.8045 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.5083 | |
6 | Q | L | 0.0000 | |
7 | T | L | -1.0785 | |
8 | P | L | -1.1669 | |
9 | R | L | -2.0919 | |
10 | S | L | -1.3404 | |
11 | L | L | -0.7357 | |
12 | P | L | -0.8472 | |
13 | V | L | 0.0000 | |
14 | S | L | -0.7450 | |
15 | L | L | -0.2046 | |
16 | G | L | -1.3338 | |
17 | D | L | -2.0357 | |
18 | Q | L | -2.2318 | |
19 | A | L | 0.0000 | |
20 | S | L | -0.8235 | |
21 | M | L | 0.0000 | |
22 | S | L | -1.1464 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.1857 | |
25 | S | L | 0.0000 | |
26 | S | L | -0.9404 | |
27 | Q | L | -1.8425 | |
28 | S | L | -1.8372 | |
29 | L | L | 0.0000 | |
30 | K | L | -2.5905 | |
31 | H | L | -2.0125 | |
32 | S | L | -1.5993 | |
34 | N | L | -2.0756 | |
35 | G | L | -1.8320 | |
36 | D | L | -1.6310 | |
37 | T | L | -1.4345 | |
38 | Y | L | -0.4374 | |
39 | L | L | 0.0000 | |
40 | H | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | L | L | 0.0000 | |
44 | Q | L | -0.8813 | |
45 | K | L | -1.3167 | |
46 | P | L | -0.9368 | |
47 | G | L | -1.4118 | |
48 | Q | L | -2.0263 | |
49 | S | L | -1.2522 | |
50 | P | L | 0.0000 | |
51 | N | L | -0.9925 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.2851 | |
56 | K | L | -0.7629 | |
57 | V | L | 0.0000 | |
65 | S | L | -0.9487 | |
66 | N | L | -1.1527 | |
67 | R | L | -1.6805 | |
68 | F | L | -0.5453 | |
69 | S | L | -0.5929 | |
70 | G | L | -0.8002 | |
71 | V | L | -0.8172 | |
72 | P | L | -1.1642 | |
74 | D | L | -2.1846 | |
75 | R | L | 0.0000 | |
76 | F | L | 0.0000 | |
77 | S | L | -1.2153 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.9912 | |
80 | G | L | -1.3194 | |
83 | S | L | -1.2171 | |
84 | G | L | -1.6602 | |
85 | T | L | -2.0065 | |
86 | E | L | -2.3941 | |
87 | F | L | 0.0000 | |
88 | T | L | -1.0382 | |
89 | F | L | 0.0000 | |
90 | K | L | -1.4476 | |
91 | I | L | 0.0000 | |
92 | S | L | -2.1417 | |
93 | R | L | -2.5463 | |
94 | V | L | 0.0000 | |
95 | E | L | -2.1853 | |
96 | A | L | -1.1971 | |
97 | E | L | -2.0371 | |
98 | D | L | 0.0000 | |
99 | L | L | -0.5655 | |
100 | G | L | 0.0000 | |
101 | V | L | -0.2876 | |
102 | Y | L | 0.0000 | |
103 | F | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | S | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | S | L | 0.3671 | |
108 | T | L | -0.4402 | |
109 | H | L | -0.1557 | |
114 | V | L | 1.0808 | |
115 | P | L | 0.0419 | |
116 | Y | L | 0.5604 | |
117 | T | L | 0.3093 | |
118 | F | L | 0.3583 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.6612 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | R | L | -1.2255 | |
124 | L | L | 0.0000 | |
125 | E | L | -0.6841 | |
126 | I | L | -0.0405 | |
127 | K | L | -1.3075 |