| Chain sequence(s) |
A: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY
C: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY B: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY D: KCNTATCATQRLANFLVRSSNNLGPVLPPTNVGSNTY input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:48)
[INFO] Main: Simulation completed successfully. (00:01:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.7618 | |
| 2 | C | A | -1.7462 | |
| 3 | N | A | -1.9534 | |
| 4 | T | A | -0.8362 | |
| 5 | A | A | -0.1275 | |
| 6 | T | A | 0.0000 | |
| 7 | C | A | 0.6997 | |
| 8 | A | A | 0.0000 | |
| 9 | T | A | -0.5336 | |
| 10 | Q | A | 0.0000 | |
| 11 | R | A | -2.4929 | |
| 12 | L | A | -0.8748 | |
| 13 | A | A | -0.0897 | |
| 14 | N | A | 1.0079 | |
| 15 | F | A | 2.2890 | |
| 16 | L | A | 0.0000 | |
| 17 | V | A | -0.2861 | |
| 18 | R | A | -2.6227 | |
| 19 | S | A | -1.8865 | |
| 20 | S | A | -1.3162 | |
| 21 | N | A | -1.3740 | |
| 22 | N | A | 0.0792 | |
| 23 | L | A | 1.5825 | |
| 24 | G | A | 1.2992 | |
| 25 | P | A | 1.3637 | |
| 26 | V | A | 2.2142 | |
| 27 | L | A | 0.9338 | |
| 28 | P | A | 0.1782 | |
| 29 | P | A | -0.5101 | |
| 30 | T | A | -0.8134 | |
| 31 | N | A | -1.4444 | |
| 32 | V | A | -0.4122 | |
| 33 | G | A | -0.9475 | |
| 34 | S | A | -0.8206 | |
| 35 | N | A | -1.0431 | |
| 36 | T | A | 0.1390 | |
| 37 | Y | A | 1.5483 | |
| 1 | K | B | -3.3107 | |
| 2 | C | B | -2.1083 | |
| 3 | N | B | -1.7127 | |
| 4 | T | B | 0.0000 | |
| 5 | A | B | -0.0830 | |
| 6 | T | B | 0.0000 | |
| 7 | C | B | 0.6043 | |
| 8 | A | B | 0.0000 | |
| 9 | T | B | -0.7790 | |
| 10 | Q | B | 0.0000 | |
| 11 | R | B | -2.9855 | |
| 12 | L | B | 0.0000 | |
| 13 | A | B | -0.3897 | |
| 14 | N | B | 0.0000 | |
| 15 | F | B | 1.7509 | |
| 16 | L | B | 0.0000 | |
| 17 | V | B | -0.7666 | |
| 18 | R | B | -3.2431 | |
| 19 | S | B | -2.3283 | |
| 20 | S | B | 0.0000 | |
| 21 | N | B | -1.1056 | |
| 22 | N | B | 0.0000 | |
| 23 | L | B | 1.1805 | |
| 24 | G | B | 0.0000 | |
| 25 | P | B | 0.0000 | |
| 26 | V | B | 1.8018 | |
| 27 | L | B | 0.0000 | |
| 28 | P | B | 0.3341 | |
| 29 | P | B | -0.5807 | |
| 30 | T | B | 0.0000 | |
| 31 | N | B | -1.3913 | |
| 32 | V | B | 0.0000 | |
| 33 | G | B | -0.8855 | |
| 34 | S | B | 0.0000 | |
| 35 | N | B | -0.4859 | |
| 36 | T | B | 0.0000 | |
| 37 | Y | B | 1.9677 | |
| 1 | K | C | -3.1387 | |
| 2 | C | C | -1.9742 | |
| 3 | N | C | -1.4925 | |
| 4 | T | C | 0.0000 | |
| 5 | A | C | -0.0568 | |
| 6 | T | C | 0.0000 | |
| 7 | C | C | 0.5196 | |
| 8 | A | C | 0.0000 | |
| 9 | T | C | -1.0119 | |
| 10 | Q | C | 0.0000 | |
| 11 | R | C | -3.1844 | |
| 12 | L | C | 0.0000 | |
| 13 | A | C | 0.0000 | |
| 14 | N | C | 0.0000 | |
| 15 | F | C | 1.8120 | |
| 16 | L | C | 0.0000 | |
| 17 | V | C | -0.4799 | |
| 18 | R | C | -3.0226 | |
| 19 | S | C | -2.2245 | |
| 20 | S | C | 0.0000 | |
| 21 | N | C | -0.9949 | |
| 22 | N | C | 0.0000 | |
| 23 | L | C | 1.2250 | |
| 24 | G | C | 0.0000 | |
| 25 | P | C | 0.0000 | |
| 26 | V | C | 1.5606 | |
| 27 | L | C | 0.0000 | |
| 28 | P | C | 0.3332 | |
| 29 | P | C | -0.5608 | |
| 30 | T | C | 0.0000 | |
| 31 | N | C | -1.3575 | |
| 32 | V | C | 0.0000 | |
| 33 | G | C | -0.9049 | |
| 34 | S | C | 0.0000 | |
| 35 | N | C | -0.3771 | |
| 36 | T | C | 0.0000 | |
| 37 | Y | C | 1.8782 | |
| 1 | K | D | -2.4044 | |
| 2 | C | D | -1.3064 | |
| 3 | N | D | -1.1013 | |
| 4 | T | D | -0.4238 | |
| 5 | A | D | -0.0549 | |
| 6 | T | D | 0.1503 | |
| 7 | C | D | 0.4437 | |
| 8 | A | D | -0.0347 | |
| 9 | T | D | -0.9043 | |
| 10 | Q | D | -1.7139 | |
| 11 | R | D | -2.4862 | |
| 12 | L | D | -0.5792 | |
| 13 | A | D | 0.0590 | |
| 14 | N | D | 0.7811 | |
| 15 | F | D | 2.1643 | |
| 16 | L | D | 1.0329 | |
| 17 | V | D | 0.2563 | |
| 18 | R | D | -2.3182 | |
| 19 | S | D | -1.6129 | |
| 20 | S | D | -1.0669 | |
| 21 | N | D | -1.2389 | |
| 22 | N | D | 0.0697 | |
| 23 | L | D | 1.4093 | |
| 24 | G | D | 1.0202 | |
| 25 | P | D | 1.4014 | |
| 26 | V | D | 1.9325 | |
| 27 | L | D | 1.0599 | |
| 28 | P | D | 0.2603 | |
| 29 | P | D | -0.4528 | |
| 30 | T | D | -0.8547 | |
| 31 | N | D | -1.3938 | |
| 32 | V | D | -0.5020 | |
| 33 | G | D | -0.7534 | |
| 34 | S | D | -0.6322 | |
| 35 | N | D | -0.8250 | |
| 36 | T | D | 0.3045 | |
| 37 | Y | D | 1.5296 |