| Chain sequence(s) |
B: MKASEEAKKQVKEAVKEIKEAAKKSEEEAKEAVEEYRGALNLGKYYGANLEEVEEAEKLLGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:30)
[INFO] Main: Simulation completed successfully. (00:03:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | -0.0380 | |
| 2 | K | B | -1.5764 | |
| 3 | A | B | -0.9157 | |
| 4 | S | B | -0.8768 | |
| 5 | E | B | -1.7137 | |
| 6 | E | B | -1.7063 | |
| 7 | A | B | 0.0000 | |
| 8 | K | B | -2.7378 | |
| 9 | K | B | -2.9971 | |
| 10 | Q | B | -2.6410 | |
| 11 | V | B | 0.0000 | |
| 12 | K | B | -3.9796 | |
| 13 | E | B | -3.8672 | |
| 14 | A | B | 0.0000 | |
| 15 | V | B | 0.0000 | |
| 16 | K | B | -4.2001 | |
| 17 | E | B | -4.0865 | |
| 18 | I | B | 0.0000 | |
| 19 | K | B | -3.7281 | |
| 20 | E | B | -4.2347 | |
| 21 | A | B | 0.0000 | |
| 22 | A | B | -3.9607 | |
| 23 | K | B | -3.9261 | |
| 24 | K | B | -3.9107 | |
| 25 | S | B | -3.7065 | |
| 26 | E | B | -4.0965 | |
| 27 | E | B | -4.1962 | |
| 28 | E | B | -4.4776 | |
| 29 | A | B | 0.0000 | |
| 30 | K | B | -4.1087 | |
| 31 | E | B | -4.4444 | |
| 32 | A | B | -3.7039 | |
| 33 | V | B | 0.0000 | |
| 34 | E | B | -3.7230 | |
| 35 | E | B | -3.5511 | |
| 36 | Y | B | -2.2448 | |
| 37 | R | B | -1.8492 | |
| 38 | G | B | -1.3003 | |
| 39 | A | B | -1.4023 | |
| 40 | L | B | 0.0000 | |
| 41 | N | B | -0.2359 | |
| 42 | L | B | 0.3418 | |
| 43 | G | B | 0.0000 | |
| 44 | K | B | -0.2184 | |
| 45 | Y | B | 1.2730 | |
| 46 | Y | B | 0.6565 | |
| 47 | G | B | -0.1354 | |
| 48 | A | B | 0.0000 | |
| 49 | N | B | -1.8740 | |
| 50 | L | B | -1.2972 | |
| 51 | E | B | -2.7439 | |
| 52 | E | B | -2.9871 | |
| 53 | V | B | 0.0000 | |
| 54 | E | B | -3.3000 | |
| 55 | E | B | -3.2129 | |
| 56 | A | B | 0.0000 | |
| 57 | E | B | -2.5045 | |
| 58 | K | B | -2.7189 | |
| 59 | L | B | -1.6212 | |
| 60 | L | B | -2.1802 | |
| 61 | G | B | -1.3582 | |
| 62 | S | B | -0.8394 | |
| 63 | G | B | -0.9001 | |
| 64 | C | B | -0.4276 |