| Chain sequence(s) |
A: GNIFSG
C: GNIFSG B: GNIFSG E: GNIFSG D: GNIFSG G: GNIFSG F: GNIFSG I: GNIFSG H: GNIFSG J: GNIFSG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:04)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:04)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:04)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:04)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | C | -1.1462 | |
| 2 | N | C | -0.5070 | |
| 3 | I | C | 0.0000 | |
| 4 | F | C | 1.4000 | |
| 5 | S | C | 0.0000 | |
| 6 | G | C | -0.5311 | |
| 1 | G | E | -1.2803 | |
| 2 | N | E | -1.0100 | |
| 3 | I | E | 0.0000 | |
| 4 | F | E | 0.8573 | |
| 5 | S | E | 0.0000 | |
| 6 | G | E | -0.7674 | |
| 1 | G | D | -1.3916 | |
| 2 | N | D | -0.8477 | |
| 3 | I | D | 0.0000 | |
| 4 | F | D | 0.8385 | |
| 5 | S | D | 0.0000 | |
| 6 | G | D | -0.5763 | |
| 1 | G | A | -0.9827 | |
| 2 | N | A | -0.5466 | |
| 3 | I | A | 1.8569 | |
| 4 | F | A | 2.3819 | |
| 5 | S | A | 0.7474 | |
| 6 | G | A | -0.2938 | |
| 1 | G | B | -1.2090 | |
| 2 | N | B | -0.9807 | |
| 3 | I | B | 1.0377 | |
| 4 | F | B | 1.7272 | |
| 5 | S | B | 0.4396 | |
| 6 | G | B | -0.3958 | |
| 1 | G | G | -1.5020 | |
| 2 | N | G | -0.9309 | |
| 3 | I | G | 0.0000 | |
| 4 | F | G | 0.8502 | |
| 5 | S | G | 0.0629 | |
| 6 | G | G | -0.5361 | |
| 1 | G | F | -1.2687 | |
| 2 | N | F | -1.0098 | |
| 3 | I | F | 0.0000 | |
| 4 | F | F | 0.8118 | |
| 5 | S | F | -0.1542 | |
| 6 | G | F | -0.7921 | |
| 1 | G | I | -1.2939 | |
| 2 | N | I | -1.2903 | |
| 3 | I | I | 0.0000 | |
| 4 | F | I | 1.6398 | |
| 5 | S | I | 0.2916 | |
| 6 | G | I | -0.3482 | |
| 1 | G | H | -1.2736 | |
| 2 | N | H | -0.7950 | |
| 3 | I | H | 0.0000 | |
| 4 | F | H | 0.9751 | |
| 5 | S | H | 0.0396 | |
| 6 | G | H | -0.5484 | |
| 1 | G | J | -1.1552 | |
| 2 | N | J | -1.0266 | |
| 3 | I | J | 0.9695 | |
| 4 | F | J | 1.8449 | |
| 5 | S | J | 0.4249 | |
| 6 | G | J | -0.3074 |