Project name: CM188-215

Status: done

Started: 2026-05-12 04:24:48
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Chain sequence(s) A: GNIFSG
C: GNIFSG
B: GNIFSG
E: GNIFSG
D: GNIFSG
G: GNIFSG
F: GNIFSG
I: GNIFSG
H: GNIFSG
J: GNIFSG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,J
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:04)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:04)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:04)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:04)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:04)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:11)
Show buried residues

Minimal score value
-1.502
Maximal score value
2.3819
Average score
-0.125
Total score value
-7.5018

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G C -1.1462
2 N C -0.5070
3 I C 0.0000
4 F C 1.4000
5 S C 0.0000
6 G C -0.5311
1 G E -1.2803
2 N E -1.0100
3 I E 0.0000
4 F E 0.8573
5 S E 0.0000
6 G E -0.7674
1 G D -1.3916
2 N D -0.8477
3 I D 0.0000
4 F D 0.8385
5 S D 0.0000
6 G D -0.5763
1 G A -0.9827
2 N A -0.5466
3 I A 1.8569
4 F A 2.3819
5 S A 0.7474
6 G A -0.2938
1 G B -1.2090
2 N B -0.9807
3 I B 1.0377
4 F B 1.7272
5 S B 0.4396
6 G B -0.3958
1 G G -1.5020
2 N G -0.9309
3 I G 0.0000
4 F G 0.8502
5 S G 0.0629
6 G G -0.5361
1 G F -1.2687
2 N F -1.0098
3 I F 0.0000
4 F F 0.8118
5 S F -0.1542
6 G F -0.7921
1 G I -1.2939
2 N I -1.2903
3 I I 0.0000
4 F I 1.6398
5 S I 0.2916
6 G I -0.3482
1 G H -1.2736
2 N H -0.7950
3 I H 0.0000
4 F H 0.9751
5 S H 0.0396
6 G H -0.5484
1 G J -1.1552
2 N J -1.0266
3 I J 0.9695
4 F J 1.8449
5 S J 0.4249
6 G J -0.3074
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Laboratory of Theory of Biopolymers 2018