| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGYSFTGHWMNWVRQAPGKGLEWVGMIHPSDSETRYNQKFKDRFTISVDKSKNTLYLQMNSLRAEDTAVYYCARGIYFYGTTYFDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASKTISKYLAWYQQKPGKAPKLLIYSGSTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHNEYPLTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1893 | |
| 2 | V | H | -1.3164 | |
| 3 | Q | H | -1.3341 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0594 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1591 | |
| 8 | G | H | -0.4662 | |
| 9 | G | H | 0.1779 | |
| 11 | G | H | 0.8089 | |
| 12 | L | H | 1.3434 | |
| 13 | V | H | -0.1046 | |
| 14 | Q | H | -1.3904 | |
| 15 | P | H | -1.5349 | |
| 16 | G | H | -1.4808 | |
| 17 | G | H | -1.0502 | |
| 18 | S | H | -1.1573 | |
| 19 | L | H | -0.7635 | |
| 20 | R | H | -1.5881 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2225 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2147 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.1802 | |
| 27 | G | H | -1.3516 | |
| 28 | Y | H | -0.8127 | |
| 29 | S | H | -0.5110 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.0153 | |
| 36 | G | H | -0.4447 | |
| 37 | H | H | -0.0627 | |
| 38 | W | H | 0.0463 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5342 | |
| 45 | A | H | -0.9908 | |
| 46 | P | H | -0.8172 | |
| 47 | G | H | -1.4567 | |
| 48 | K | H | -2.3226 | |
| 49 | G | H | -1.5409 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6520 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | M | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | H | H | -1.3122 | |
| 58 | P | H | 0.0000 | |
| 59 | S | H | -1.5668 | |
| 62 | D | H | -2.3272 | |
| 63 | S | H | -1.8328 | |
| 64 | E | H | -2.0833 | |
| 65 | T | H | -1.3023 | |
| 66 | R | H | -1.3603 | |
| 67 | Y | H | -1.4781 | |
| 68 | N | H | -2.0195 | |
| 69 | Q | H | -3.1124 | |
| 70 | K | H | -3.0722 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.6007 | |
| 74 | D | H | -3.2807 | |
| 75 | R | H | -2.2281 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -1.1683 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2840 | |
| 80 | V | H | -1.0126 | |
| 81 | D | H | -1.5663 | |
| 82 | K | H | -2.2624 | |
| 83 | S | H | -1.8850 | |
| 84 | K | H | -2.6297 | |
| 85 | N | H | -2.1637 | |
| 86 | T | H | -1.0914 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3317 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0906 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.4680 | |
| 93 | S | H | -1.4192 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.4294 | |
| 96 | A | H | -1.7608 | |
| 97 | E | H | -2.2274 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3813 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.8001 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | I | H | 1.6408 | |
| 109 | Y | H | 2.6275 | |
| 110 | F | H | 3.2212 | |
| 111 | Y | H | 2.4506 | |
| 112A | G | H | 1.4041 | |
| 112 | T | H | 0.0000 | |
| 113 | T | H | 0.0000 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.0430 | |
| 117 | Y | H | 0.0829 | |
| 118 | W | H | -0.2549 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3083 | |
| 121 | G | H | -0.2494 | |
| 122 | T | H | 0.5887 | |
| 123 | L | H | 1.6619 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3396 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5442 | |
| 128 | S | H | -0.4947 | |
| 1 | D | L | -2.2296 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2594 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3955 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7369 | |
| 8 | P | L | -0.5517 | |
| 9 | S | L | -0.8711 | |
| 10 | S | L | -0.8875 | |
| 11 | L | L | -0.4373 | |
| 12 | S | L | -0.4362 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.1126 | |
| 15 | V | L | 0.6495 | |
| 16 | G | L | -0.5182 | |
| 17 | D | L | -1.3878 | |
| 18 | R | L | -2.1546 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6091 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7837 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.6364 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.8659 | |
| 27 | K | L | -1.8890 | |
| 28 | T | L | -1.2828 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.2443 | |
| 37 | K | L | -1.8841 | |
| 38 | Y | L | -0.7558 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -1.0079 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.8305 | |
| 46 | P | L | -1.2708 | |
| 47 | G | L | -1.7208 | |
| 48 | K | L | -2.6525 | |
| 49 | A | L | -1.5924 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.5418 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0000 | |
| 56 | S | L | 0.0000 | |
| 57 | G | L | 0.0000 | |
| 65 | S | L | -0.5011 | |
| 66 | T | L | 0.1735 | |
| 67 | L | L | 0.2071 | |
| 68 | Q | L | -0.3284 | |
| 69 | S | L | -0.4034 | |
| 70 | G | L | -0.5749 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.3973 | |
| 74 | S | L | -0.4069 | |
| 75 | R | L | -0.7039 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3053 | |
| 78 | G | L | -0.2999 | |
| 79 | S | L | -0.8301 | |
| 80 | G | L | -1.3227 | |
| 83 | S | L | -1.4103 | |
| 84 | G | L | -1.3207 | |
| 85 | T | L | -1.6944 | |
| 86 | D | L | -1.9841 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6978 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5969 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2338 | |
| 93 | S | L | -1.0260 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.5878 | |
| 96 | P | L | -0.6269 | |
| 97 | E | L | -1.8001 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3149 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.9882 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.0000 | |
| 108 | N | L | -0.7470 | |
| 109 | E | L | -0.4299 | |
| 114 | Y | L | 0.1492 | |
| 115 | P | L | -0.6141 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.7269 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.4770 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4191 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.2536 | |
| 126 | I | L | 1.0530 | |
| 127 | K | L | -0.6271 |