| Chain sequence(s) |
B: CGSGLAPNNKISEEAAKNVAEYYEETKKKYEEGKASEEELKEAEKLAENVKEAAKKSGTKFKEP
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:48)
[INFO] Main: Simulation completed successfully. (00:03:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | B | 0.3842 | |
| 2 | G | B | -0.0918 | |
| 3 | S | B | -0.4913 | |
| 4 | G | B | -1.1021 | |
| 5 | L | B | -0.8015 | |
| 6 | A | B | -1.1281 | |
| 7 | P | B | -1.4314 | |
| 8 | N | B | -2.5407 | |
| 9 | N | B | -2.9040 | |
| 10 | K | B | -3.3718 | |
| 11 | I | B | 0.0000 | |
| 12 | S | B | -2.6444 | |
| 13 | E | B | -3.9928 | |
| 14 | E | B | -3.6760 | |
| 15 | A | B | -2.2912 | |
| 16 | A | B | 0.0000 | |
| 17 | K | B | -3.9368 | |
| 18 | N | B | -3.1199 | |
| 19 | V | B | 0.0000 | |
| 20 | A | B | 0.0000 | |
| 21 | E | B | -3.3635 | |
| 22 | Y | B | -1.7706 | |
| 23 | Y | B | -3.3258 | |
| 24 | E | B | -3.4492 | |
| 25 | E | B | -3.3437 | |
| 26 | T | B | 0.0000 | |
| 27 | K | B | -4.2543 | |
| 28 | K | B | -4.3966 | |
| 29 | K | B | -4.2739 | |
| 30 | Y | B | -3.8838 | |
| 31 | E | B | -4.2340 | |
| 32 | E | B | -4.1025 | |
| 33 | G | B | -3.2694 | |
| 34 | K | B | -3.4695 | |
| 35 | A | B | -3.2343 | |
| 36 | S | B | -3.1238 | |
| 37 | E | B | -4.1359 | |
| 38 | E | B | -4.5016 | |
| 39 | E | B | -4.5381 | |
| 40 | L | B | -4.4997 | |
| 41 | K | B | -4.9936 | |
| 42 | E | B | -4.8969 | |
| 43 | A | B | 0.0000 | |
| 44 | E | B | -3.9826 | |
| 45 | K | B | -4.0990 | |
| 46 | L | B | -2.4434 | |
| 47 | A | B | 0.0000 | |
| 48 | E | B | -3.4665 | |
| 49 | N | B | -2.6948 | |
| 50 | V | B | 0.0000 | |
| 51 | K | B | -3.8324 | |
| 52 | E | B | -3.4309 | |
| 53 | A | B | -3.4621 | |
| 54 | A | B | 0.0000 | |
| 55 | K | B | -3.9660 | |
| 56 | K | B | -3.7336 | |
| 57 | S | B | -3.0141 | |
| 58 | G | B | -2.5523 | |
| 59 | T | B | -3.2407 | |
| 60 | K | B | -3.6161 | |
| 61 | F | B | -3.5461 | |
| 62 | K | B | -4.0207 | |
| 63 | E | B | -3.7007 | |
| 64 | P | B | -2.3488 |