Chain sequence(s) |
H: SEVQLVESGGGLVQPGGSLRLSCAASGFNVYYSSIHWVRQAPGKGLEWVASIYSYYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARNVGYGMDYWGQGTLVTVSSASTKGPSVFPLAPAATAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTYICNVNHKPSNTKVDKKVE
L: SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYIDGLITFGQGTKVEIKRTVAAPSVFIFPPSAKSGTASVVCLLNNFYPREAKVQWAAASQESVTEQDSKDSTYSLSSTLTLYEKHKVYACEVTHQGLSSPVTK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | YD55H |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.713071 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:01:07) [INFO] FoldX: Starting FoldX energy minimalization (00:01:13) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:20) [INFO] Main: Simulation completed successfully. (00:02:22) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
3 | S | H | -1.1958 | |
4 | E | H | -2.0200 | |
5 | V | H | -1.0022 | |
6 | Q | H | -0.8048 | |
7 | L | H | 0.0000 | |
8 | V | H | 0.6848 | |
9 | E | H | 0.0000 | |
10 | S | H | -0.4285 | |
11 | G | H | -0.6777 | |
12 | G | H | -0.3448 | |
13 | G | H | -0.0010 | |
14 | L | H | 0.0325 | |
15 | V | H | 0.0000 | |
16 | Q | H | -1.6631 | |
17 | P | H | -1.9364 | |
18 | G | H | -1.6735 | |
19 | G | H | -1.3338 | |
20 | S | H | -1.2930 | |
21 | L | H | -1.0110 | |
22 | R | H | -1.5925 | |
23 | L | H | 0.0000 | |
24 | S | H | -0.3497 | |
25 | C | H | 0.0000 | |
26 | A | H | -0.1457 | |
27 | A | H | -0.3277 | |
28 | S | H | -0.6750 | |
29 | G | H | -1.0932 | |
30 | F | H | -0.2135 | |
31 | N | H | -0.4085 | |
32 | V | H | 0.0000 | |
33 | Y | H | 1.1331 | |
34 | Y | H | 1.7930 | |
35 | S | H | 0.0000 | |
36 | S | H | 0.0000 | |
37 | I | H | 0.0000 | |
38 | H | H | 0.0000 | |
39 | W | H | 0.0000 | |
40 | V | H | 0.0000 | |
41 | R | H | 0.0000 | |
42 | Q | H | -0.7846 | |
43 | A | H | -1.1510 | |
44 | P | H | -0.9352 | |
45 | G | H | -1.4874 | |
46 | K | H | -2.3575 | |
47 | G | H | -1.6206 | |
48 | L | H | 0.0000 | |
49 | E | H | -1.1930 | |
50 | W | H | 0.0000 | |
51 | V | H | 0.0000 | |
52 | A | H | 0.0000 | |
53 | S | H | 0.0000 | |
54 | I | H | 0.0000 | |
55 | D | H | 0.6106 | mutated: YD55H |
56 | S | H | 0.9798 | |
57 | Y | H | 2.0777 | |
58 | Y | H | 2.0130 | |
59 | G | H | 0.9558 | |
60 | Y | H | 1.4090 | |
61 | T | H | 0.5218 | |
62 | S | H | -0.3502 | |
63 | Y | H | -0.8634 | |
64 | A | H | -1.3820 | |
65 | D | H | -2.4885 | |
66 | S | H | -1.7786 | |
67 | V | H | 0.0000 | |
68 | K | H | -2.4716 | |
69 | G | H | -1.8290 | |
70 | R | H | -1.8211 | |
71 | F | H | 0.0000 | |
72 | T | H | -0.9489 | |
73 | I | H | 0.0000 | |
74 | S | H | -0.3289 | |
75 | A | H | -0.6502 | |
76 | D | H | -1.3628 | |
77 | T | H | -0.8487 | |
78 | S | H | -1.3628 | |
79 | K | H | -2.2126 | |
80 | N | H | -1.4450 | |
81 | T | H | 0.0000 | |
82 | A | H | 0.0000 | |
83 | Y | H | 0.0000 | |
84 | L | H | 0.0000 | |
85 | Q | H | -1.2852 | |
86 | M | H | 0.0000 | |
87 | N | H | -2.1597 | |
88 | S | H | -1.7119 | |
89 | L | H | 0.0000 | |
90 | R | H | -2.9868 | |
91 | A | H | -2.0426 | |
92 | E | H | -2.4741 | |
93 | D | H | 0.0000 | |
94 | T | H | -0.8142 | |
95 | A | H | 0.0000 | |
96 | V | H | 0.2374 | |
97 | Y | H | 0.0000 | |
98 | Y | H | 0.0000 | |
99 | C | H | 0.0000 | |
100 | A | H | 0.0000 | |
101 | R | H | 0.0000 | |
102 | N | H | 0.3546 | |
103 | V | H | 0.9699 | |
104 | G | H | 0.5129 | |
105 | Y | H | 1.2453 | |
106 | G | H | 0.5991 | |
107 | M | H | 0.0000 | |
108 | D | H | 0.2477 | |
109 | Y | H | 0.1570 | |
110 | W | H | -0.2326 | |
111 | G | H | 0.0000 | |
112 | Q | H | -1.3280 | |
113 | G | H | -0.6191 | |
114 | T | H | -0.0521 | |
115 | L | H | 0.3006 | |
116 | V | H | 0.0000 | |
117 | T | H | 0.0000 | |
118 | V | H | 0.0000 | |
119 | S | H | -1.0349 | |
120 | S | H | -0.6327 | |
121 | A | H | -0.4954 | |
122 | S | H | -0.6717 | |
123 | T | H | -0.9036 | |
124 | K | H | -1.6379 | |
125 | G | H | -1.6519 | |
126 | P | H | -0.7206 | |
127 | S | H | -0.2214 | |
128 | V | H | 0.0000 | |
129 | F | H | -0.1367 | |
130 | P | H | -0.5124 | |
131 | L | H | 0.0000 | |
132 | A | H | -0.6295 | |
133 | P | H | -0.2564 | |
134 | A | H | -0.1073 | |
135 | A | H | 0.0487 | |
142 | T | H | -0.2698 | |
143 | A | H | -0.1797 | |
144 | A | H | 0.0000 | |
145 | L | H | 0.0000 | |
146 | G | H | 0.0000 | |
147 | C | H | 0.0000 | |
148 | L | H | 0.0000 | |
149 | V | H | 0.0000 | |
150 | K | H | 0.0000 | |
151 | D | H | -0.4832 | |
152 | Y | H | 0.0000 | |
153 | F | H | 0.0000 | |
154 | P | H | 0.0000 | |
155 | E | H | -0.5116 | |
156 | P | H | -0.6786 | |
157 | V | H | -0.7850 | |
158 | T | H | -0.7132 | |
159 | V | H | -0.4820 | |
160 | S | H | -0.4947 | |
161 | W | H | 0.0000 | |
162 | N | H | -0.8886 | |
163 | S | H | -0.7537 | |
164 | G | H | -0.6205 | |
165 | A | H | -0.2936 | |
166 | L | H | -0.0017 | |
167 | T | H | -0.1961 | |
168 | S | H | -0.1960 | |
169 | G | H | -0.3324 | |
170 | V | H | 0.1319 | |
171 | H | H | -0.4077 | |
172 | T | H | -0.2077 | |
173 | F | H | 0.0000 | |
174 | P | H | -0.3850 | |
175 | A | H | 0.1542 | |
176 | V | H | 0.3332 | |
177 | L | H | 0.9077 | |
178 | Q | H | 0.1565 | |
179 | S | H | -0.1074 | |
180 | S | H | -0.2461 | |
181 | G | H | -0.0160 | |
182 | L | H | -0.0087 | |
183 | Y | H | 0.2749 | |
184 | S | H | 0.0000 | |
185 | L | H | 0.0000 | |
186 | S | H | 0.0000 | |
187 | S | H | 0.0000 | |
188 | V | H | 0.0000 | |
189 | V | H | 0.0000 | |
190 | T | H | -0.1971 | |
191 | V | H | 0.0000 | |
192 | P | H | -0.2853 | |
193 | S | H | -0.2122 | |
194 | S | H | -0.0871 | |
195 | S | H | 0.2770 | |
196 | L | H | 0.8603 | |
197 | G | H | 0.0211 | |
200 | T | H | -0.4034 | |
201 | Y | H | -0.4554 | |
202 | I | H | -1.0545 | |
203 | C | H | 0.0000 | |
204 | N | H | -1.6726 | |
205 | V | H | 0.0000 | |
206 | N | H | -2.3228 | |
207 | H | H | 0.0000 | |
208 | K | H | -2.8537 | |
209 | P | H | -1.6609 | |
210 | S | H | -2.0030 | |
211 | N | H | -2.7104 | |
212 | T | H | -2.2552 | |
213 | K | H | -2.8887 | |
214 | V | H | -1.7681 | |
215 | D | H | -2.6900 | |
216 | K | H | -2.2434 | |
217 | K | H | -2.2511 | |
218 | V | H | 0.0000 | |
219 | E | H | -1.9183 | |
1 | S | L | -1.6773 | |
2 | D | L | -2.1803 | |
3 | I | L | -1.4567 | |
4 | Q | L | -2.0977 | |
5 | M | L | 0.0000 | |
6 | T | L | -1.3905 | |
7 | Q | L | 0.0000 | |
8 | S | L | -0.9222 | |
9 | P | L | -0.6282 | |
10 | S | L | -0.9594 | |
11 | S | L | -0.9074 | |
12 | L | L | -0.5213 | |
13 | S | L | -0.8938 | |
14 | A | L | 0.0000 | |
15 | S | L | -0.6025 | |
16 | V | L | 0.2107 | |
17 | G | L | -0.7293 | |
18 | D | L | -1.4715 | |
19 | R | L | -2.2013 | |
20 | V | L | 0.0000 | |
21 | T | L | -0.5866 | |
22 | I | L | 0.0000 | |
23 | T | L | -0.8318 | |
24 | C | L | 0.0000 | |
25 | R | L | -2.4987 | |
26 | A | L | 0.0000 | |
27 | S | L | -1.2454 | |
28 | Q | L | -0.5987 | |
29 | S | L | 0.1230 | |
30 | V | L | 1.3236 | |
31 | S | L | 0.0000 | |
32 | S | L | 0.1634 | |
33 | A | L | 0.4224 | |
34 | V | L | 0.0000 | |
35 | A | L | 0.0000 | |
36 | W | L | 0.0000 | |
37 | Y | L | 0.0000 | |
38 | Q | L | 0.0000 | |
39 | Q | L | 0.0000 | |
40 | K | L | -1.6879 | |
41 | P | L | -1.5743 | |
42 | G | L | -1.6491 | |
43 | K | L | -2.5255 | |
44 | A | L | -1.4751 | |
45 | P | L | 0.0000 | |
46 | K | L | -1.0361 | |
47 | L | L | 0.0000 | |
48 | L | L | 0.0000 | |
49 | I | L | 0.0000 | |
50 | Y | L | 0.5205 | |
51 | S | L | 0.1270 | |
52 | A | L | 0.0000 | |
53 | S | L | -0.3183 | |
54 | S | L | 0.3146 | |
55 | L | L | 0.6027 | |
56 | Y | L | 0.4503 | |
57 | S | L | -0.0143 | |
58 | G | L | -0.3857 | |
59 | V | L | -0.1595 | |
60 | P | L | -0.3302 | |
61 | S | L | -0.4029 | |
62 | R | L | -0.7790 | |
63 | F | L | 0.0000 | |
64 | S | L | -0.2470 | |
65 | G | L | -0.3693 | |
66 | S | L | -0.8730 | |
67 | R | L | -1.4932 | |
68 | S | L | -1.2176 | |
69 | G | L | -1.0601 | |
70 | T | L | -1.1599 | |
71 | D | L | -1.7015 | |
72 | F | L | 0.0000 | |
73 | T | L | -0.7843 | |
74 | L | L | 0.0000 | |
75 | T | L | -0.6056 | |
76 | I | L | 0.0000 | |
77 | S | L | -1.3062 | |
78 | S | L | -1.1298 | |
79 | L | L | 0.0000 | |
80 | Q | L | -0.9620 | |
81 | P | L | -1.1953 | |
82 | E | L | -1.9288 | |
83 | D | L | 0.0000 | |
84 | F | L | -0.6778 | |
85 | A | L | 0.0000 | |
86 | T | L | -1.0128 | |
87 | Y | L | 0.0000 | |
88 | Y | L | 0.0000 | |
89 | C | L | 0.0000 | |
90 | Q | L | 0.0000 | |
91 | Q | L | 0.0000 | |
92 | Y | L | 0.4905 | |
93 | I | L | 0.0000 | |
94 | D | L | -1.3750 | |
95 | G | L | -0.5285 | |
96 | L | L | -0.0946 | |
97 | I | L | 0.0000 | |
98 | T | L | -0.2986 | |
99 | F | L | 0.0000 | |
100 | G | L | 0.0000 | |
101 | Q | L | -1.8538 | |
102 | G | L | 0.0000 | |
103 | T | L | 0.0000 | |
104 | K | L | -1.8747 | |
105 | V | L | 0.0000 | |
106 | E | L | -1.3317 | |
107 | I | L | -0.6858 | |
108 | K | L | -1.6067 | |
109 | R | L | -1.2984 | |
110 | T | L | -0.1653 | |
111 | V | L | 0.3996 | |
112 | A | L | 0.1814 | |
113 | A | L | -0.1224 | |
114 | P | L | 0.0000 | |
115 | S | L | -0.2227 | |
116 | V | L | 0.0000 | |
117 | F | L | -0.0328 | |
118 | I | L | 0.0518 | |
119 | F | L | 0.0000 | |
120 | P | L | -0.2418 | |
121 | P | L | -0.4498 | |
122 | S | L | -0.5443 | |
126 | A | L | -0.8892 | |
127 | K | L | -1.9217 | |
128 | S | L | -1.2779 | |
129 | G | L | -0.8833 | |
130 | T | L | -0.3456 | |
131 | A | L | -0.1176 | |
132 | S | L | 0.1488 | |
133 | V | L | 0.0000 | |
134 | V | L | 0.0000 | |
135 | C | L | 0.0000 | |
136 | L | L | 0.0000 | |
137 | L | L | 0.0000 | |
138 | N | L | -0.4450 | |
139 | N | L | -1.0485 | |
140 | F | L | 0.0000 | |
141 | Y | L | -1.1270 | |
142 | P | L | -1.7386 | |
143 | R | L | -3.0977 | |
144 | E | L | -3.2154 | |
145 | A | L | -2.2488 | |
146 | K | L | -2.3017 | |
147 | V | L | -1.3386 | |
148 | Q | L | -1.3271 | |
149 | W | L | -0.3725 | |
157 | A | L | -0.0280 | |
158 | A | L | 0.0394 | |
159 | A | L | 0.2716 | |
160 | S | L | -0.5537 | |
161 | Q | L | -1.2609 | |
162 | E | L | -1.9568 | |
163 | S | L | -0.8605 | |
164 | V | L | -0.8663 | |
165 | T | L | -1.2427 | |
166 | E | L | -2.3404 | |
167 | Q | L | -1.9335 | |
168 | D | L | -1.9541 | |
169 | S | L | -1.8998 | |
170 | K | L | -2.2526 | |
171 | D | L | -1.7298 | |
172 | S | L | 0.0000 | |
173 | T | L | 0.0000 | |
174 | Y | L | 0.0000 | |
175 | S | L | 0.0000 | |
176 | L | L | 0.0000 | |
177 | S | L | 0.0000 | |
178 | S | L | 0.0000 | |
179 | T | L | -0.3414 | |
180 | L | L | 0.0569 | |
181 | T | L | 0.6670 | |
182 | L | L | 1.4655 | |
187 | Y | L | -0.2753 | |
188 | E | L | -2.4362 | |
189 | K | L | -3.0489 | |
190 | H | L | -2.7077 | |
191 | K | L | -2.5176 | |
192 | V | L | -1.4754 | |
193 | Y | L | -1.3069 | |
194 | A | L | -0.8088 | |
195 | C | L | 0.0000 | |
196 | E | L | -1.1609 | |
197 | V | L | 0.0000 | |
198 | T | L | -1.2212 | |
199 | H | L | 0.0000 | |
200 | Q | L | -1.5290 | |
201 | G | L | -0.3783 | |
202 | L | L | -0.2508 | |
203 | S | L | -0.4800 | |
204 | S | L | -0.4394 | |
205 | P | L | -0.6208 | |
206 | V | L | -0.2120 | |
207 | T | L | -0.8926 | |
208 | K | L | -1.4455 |