| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | TY114C,YE95C,YD59C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 7.45314 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:24)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:24)
[INFO] Main: Simulation completed successfully. (00:01:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.0068 | |
| 2 | V | C | -0.9429 | |
| 3 | Q | C | -1.2891 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.6299 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.0453 | |
| 8 | G | C | -0.4870 | |
| 9 | G | C | 0.3114 | |
| 10 | G | C | 1.0599 | |
| 11 | L | C | 1.4373 | |
| 12 | V | C | -0.0308 | |
| 13 | Q | C | -1.3366 | |
| 14 | P | C | -1.4885 | |
| 15 | G | C | -1.4134 | |
| 16 | G | C | -0.9789 | |
| 17 | S | C | -1.2324 | |
| 18 | L | C | -0.9310 | |
| 19 | R | C | -2.0966 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.3583 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.1615 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -0.2077 | |
| 26 | D | C | 0.0000 | |
| 27 | F | C | 1.5458 | |
| 28 | T | C | 0.2525 | |
| 29 | F | C | 0.0000 | |
| 30 | R | C | -2.0331 | |
| 31 | S | C | -0.8871 | |
| 32 | Y | C | -1.2179 | |
| 33 | E | C | -1.0948 | |
| 34 | M | C | 0.0000 | |
| 35 | S | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -0.4637 | |
| 40 | A | C | -1.0343 | |
| 41 | P | C | -1.2942 | |
| 42 | G | C | -1.4571 | |
| 43 | K | C | -2.1828 | |
| 44 | G | C | -1.1586 | |
| 45 | L | C | 0.1348 | |
| 46 | E | C | -0.5037 | |
| 47 | W | C | 0.2169 | |
| 48 | V | C | 0.0000 | |
| 49 | S | C | 0.0000 | |
| 50 | A | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | S | C | -0.8821 | |
| 53 | G | C | -1.2616 | |
| 54 | S | C | -1.2472 | |
| 55 | G | C | -1.1166 | |
| 56 | G | C | -0.7876 | |
| 57 | S | C | -0.9495 | |
| 58 | T | C | -1.0505 | |
| 59 | D | C | -1.8416 | mutated: YD59C |
| 60 | Y | C | -1.5541 | |
| 61 | A | C | -1.6626 | |
| 62 | D | C | -2.6133 | |
| 63 | S | C | -1.7163 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.7259 | |
| 66 | G | C | -1.6185 | |
| 67 | R | C | 0.0000 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.9513 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.5745 | |
| 72 | R | C | -1.3626 | |
| 73 | D | C | -1.9805 | |
| 74 | N | C | -2.1901 | |
| 75 | S | C | -1.7905 | |
| 76 | K | C | -2.3163 | |
| 77 | N | C | -1.6492 | |
| 78 | T | C | 0.0000 | |
| 79 | L | C | 0.0000 | |
| 80 | Y | C | -0.6280 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.2341 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.3333 | |
| 85 | S | C | -1.2327 | |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -2.4721 | |
| 88 | A | C | -1.8893 | |
| 89 | E | C | -2.3445 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.4357 | |
| 92 | A | C | 0.0000 | |
| 93 | I | C | 1.1417 | |
| 94 | Y | C | 0.0000 | |
| 95 | E | C | 0.3221 | mutated: YE95C |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | R | C | 0.0000 | |
| 99 | L | C | 0.0000 | |
| 100 | R | C | -3.1363 | |
| 101 | D | C | -3.2619 | |
| 102 | G | C | -1.9283 | |
| 103 | F | C | -1.2083 | |
| 104 | N | C | -2.2712 | |
| 105 | K | C | -3.0962 | |
| 106 | G | C | -1.8345 | |
| 107 | F | C | -0.9658 | |
| 108 | D | C | -1.1388 | |
| 109 | Y | C | -0.3032 | |
| 110 | W | C | 0.2777 | |
| 111 | G | C | -0.1739 | |
| 112 | Q | C | -0.8421 | |
| 113 | G | C | 0.2613 | |
| 114 | Y | C | 1.1788 | mutated: TY114C |
| 115 | L | C | 1.9898 | |
| 116 | V | C | 0.0000 | |
| 117 | T | C | 0.3261 | |
| 118 | V | C | 0.0000 | |
| 119 | S | C | -0.7746 | |
| 120 | S | C | -1.0601 |