| Chain sequence(s) |
A: GHKGHKGHKGFILRGHKGHKGHKGFILRGHKGHKGHKGFILRGHKGHKGHKGFILRGHKGHKGHK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.3681 | |
| 2 | H | A | -2.2950 | |
| 3 | K | A | -2.9677 | |
| 4 | G | A | -2.7678 | |
| 5 | H | A | -2.8777 | |
| 6 | K | A | -3.3210 | |
| 7 | G | A | -3.2980 | |
| 8 | H | A | -3.0557 | |
| 9 | K | A | -2.5609 | |
| 10 | G | A | -0.3590 | |
| 11 | F | A | 2.2592 | |
| 12 | I | A | 0.0000 | |
| 13 | L | A | 2.4014 | |
| 14 | R | A | 0.9409 | |
| 15 | G | A | -1.2818 | |
| 16 | H | A | -3.0128 | |
| 17 | K | A | -4.2106 | |
| 18 | G | A | -4.6945 | |
| 19 | H | A | -4.0670 | |
| 20 | K | A | -4.3811 | |
| 21 | G | A | -4.4227 | |
| 22 | H | A | -4.4643 | |
| 23 | K | A | -4.0570 | |
| 24 | G | A | 0.0000 | |
| 25 | F | A | 0.0000 | |
| 26 | I | A | 1.7146 | |
| 27 | L | A | 2.5056 | |
| 28 | R | A | -0.1968 | |
| 29 | G | A | 0.0000 | |
| 30 | H | A | -2.9202 | |
| 31 | K | A | -4.1920 | |
| 32 | G | A | -3.3396 | |
| 33 | H | A | -3.6258 | |
| 34 | K | A | -3.5532 | |
| 35 | G | A | -3.5421 | |
| 36 | H | A | -3.6284 | |
| 37 | K | A | -2.8493 | |
| 38 | G | A | -0.9828 | |
| 39 | F | A | 1.0501 | |
| 40 | I | A | 2.2550 | |
| 41 | L | A | 1.8194 | |
| 42 | R | A | -1.5439 | |
| 43 | G | A | -1.4712 | |
| 44 | H | A | -3.2521 | |
| 45 | K | A | -4.2376 | |
| 46 | G | A | -3.8869 | |
| 47 | H | A | -4.1349 | |
| 48 | K | A | -4.2009 | |
| 49 | G | A | -3.3557 | |
| 50 | H | A | -3.3909 | |
| 51 | K | A | -2.9844 | |
| 52 | G | A | -0.5091 | |
| 53 | F | A | 2.3037 | |
| 54 | I | A | 3.0656 | |
| 55 | L | A | 2.8403 | |
| 56 | R | A | 0.3406 | |
| 57 | G | A | -2.1348 | |
| 58 | H | A | -3.3140 | |
| 59 | K | A | -3.6227 | |
| 60 | G | A | -3.4625 | |
| 61 | H | A | -3.3659 | |
| 62 | K | A | -3.5640 | |
| 63 | G | A | -2.8620 | |
| 64 | H | A | -2.6417 | |
| 65 | K | A | -2.5124 |