| Chain sequence(s) |
A: GAPPLNPEPELIPTSEYVTPTDLLYYAETDLLTEEGHPFKDIVVDGKVVVPRVSAYQWKVFKLTLPDPNTLPLPSADFLDRSTEIAIWRLLAFKIHVFGELGVGTYGHPNYNALGDVNNPTSYVHEGEDDTQNLSWTPKYKQSYIIGNKPPIGVYIAKAPPEPGLPPGAIPPLTRVSTLIEHGDMADIGYGARDYKELEPEKNNVPEIILDTVTKVIDYDGMKAEPTGDRMFTSDEYEKSYDVKKLRRCGPDLIPLPNSPPPSKLYTKPPASSPYAVLPSYNYFTIPDRGEISEEDLLFNKPIFLEKAEGKNDFILWGNQLYITVLDNSRDEIEEIRTRISTPEENVYDPSNYVTSYRYKREYKISLIIQLCKIPLTPEVLALLERLDPRILVDSKLPFVPPVERPDPLAGKKFIEIDLKDKLSSDLEKSELGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5386 | |
| 2 | A | A | -0.0938 | |
| 3 | P | A | -0.3269 | |
| 4 | P | A | -0.4417 | |
| 5 | L | A | 0.5064 | |
| 6 | N | A | -1.3283 | |
| 7 | P | A | -1.8914 | |
| 8 | E | A | -2.7222 | |
| 9 | P | A | -2.0603 | |
| 10 | E | A | -2.1170 | |
| 11 | L | A | -0.7119 | |
| 12 | I | A | -0.0578 | |
| 13 | P | A | -0.6766 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.3277 | |
| 16 | E | A | -1.8273 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.6114 | |
| 20 | P | A | -0.7113 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6286 | |
| 23 | L | A | -0.5207 | |
| 24 | L | A | -0.1505 | |
| 25 | Y | A | 0.0059 | |
| 26 | Y | A | -0.5886 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.8472 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.5173 | |
| 31 | L | A | 0.3953 | |
| 32 | L | A | 0.2261 | |
| 33 | T | A | -0.6652 | |
| 34 | E | A | -1.5840 | |
| 35 | E | A | -2.5645 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.4122 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.9653 | |
| 40 | K | A | -1.8587 | |
| 41 | D | A | -0.6793 | |
| 42 | I | A | 1.3239 | |
| 43 | V | A | 2.1494 | |
| 44 | V | A | 1.6034 | |
| 45 | D | A | -0.9816 | |
| 46 | G | A | -0.5802 | |
| 47 | K | A | -0.2604 | |
| 48 | V | A | 1.8278 | |
| 49 | V | A | 2.4415 | |
| 50 | V | A | 0.9571 | |
| 51 | P | A | -0.3456 | |
| 52 | R | A | -1.3113 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.5810 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.9022 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.8301 | |
| 70 | T | A | -0.1669 | |
| 71 | L | A | -0.0113 | |
| 72 | P | A | -0.1222 | |
| 73 | L | A | -0.0973 | |
| 74 | P | A | -0.3631 | |
| 75 | S | A | -0.6775 | |
| 76 | A | A | -1.2447 | |
| 77 | D | A | -2.2284 | |
| 78 | F | A | -1.1600 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -3.0010 | |
| 81 | R | A | -3.0496 | |
| 82 | S | A | -1.7688 | |
| 83 | T | A | -1.4201 | |
| 84 | E | A | -1.7110 | |
| 85 | I | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3702 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.1580 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.3684 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.1764 | |
| 99 | G | A | -1.2229 | |
| 100 | E | A | -1.6632 | |
| 101 | L | A | -0.4806 | |
| 102 | G | A | -0.0541 | |
| 103 | V | A | 0.9416 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | 0.0689 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.7957 | |
| 108 | H | A | -1.6182 | |
| 109 | P | A | -1.8549 | |
| 110 | N | A | -2.7808 | |
| 111 | Y | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.1617 | |
| 116 | D | A | -1.9888 | |
| 117 | V | A | -1.2935 | |
| 118 | N | A | -2.3541 | |
| 119 | N | A | -2.4083 | |
| 120 | P | A | -1.3479 | |
| 121 | T | A | -0.6927 | |
| 122 | S | A | -0.2413 | |
| 123 | Y | A | 0.8615 | |
| 124 | V | A | 0.2408 | |
| 125 | H | A | -0.2253 | |
| 126 | E | A | -1.7767 | |
| 127 | G | A | -2.4530 | |
| 128 | E | A | -3.1664 | |
| 129 | D | A | -3.4011 | |
| 130 | D | A | -2.4858 | |
| 131 | T | A | -2.2986 | |
| 132 | Q | A | -2.4767 | |
| 133 | N | A | -2.2921 | |
| 134 | L | A | -1.1622 | |
| 135 | S | A | -0.6633 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | 0.2871 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Y | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | N | A | 0.0000 | |
| 149 | K | A | -0.5126 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | 0.1896 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.0000 | |
| 155 | Y | A | -0.3013 | |
| 156 | I | A | -0.1806 | |
| 157 | A | A | 0.0000 | |
| 158 | K | A | -1.1210 | |
| 159 | A | A | -0.5476 | |
| 160 | P | A | -0.8839 | |
| 161 | P | A | -1.0309 | |
| 162 | E | A | -2.0740 | |
| 163 | P | A | -1.2911 | |
| 164 | G | A | -0.8036 | |
| 165 | L | A | 0.0204 | |
| 166 | P | A | -0.0135 | |
| 167 | P | A | -0.2041 | |
| 168 | G | A | 0.2329 | |
| 169 | A | A | 0.9751 | |
| 170 | I | A | 2.2097 | |
| 171 | P | A | 0.7313 | |
| 172 | P | A | 0.4490 | |
| 173 | L | A | 1.0174 | |
| 174 | T | A | -0.3188 | |
| 175 | R | A | -1.3647 | |
| 176 | V | A | -0.4874 | |
| 177 | S | A | -0.2358 | |
| 178 | T | A | 0.1309 | |
| 179 | L | A | -0.1919 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.0741 | |
| 182 | H | A | -1.1486 | |
| 183 | G | A | -0.6960 | |
| 184 | D | A | -0.5818 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3356 | |
| 190 | Y | A | -0.1726 | |
| 191 | G | A | -0.2335 | |
| 192 | A | A | -0.3500 | |
| 193 | R | A | -1.2288 | |
| 194 | D | A | -1.7745 | |
| 195 | Y | A | 0.0000 | |
| 196 | K | A | -3.9520 | |
| 197 | E | A | -3.5519 | |
| 198 | L | A | -2.0564 | |
| 199 | E | A | -2.7402 | |
| 200 | P | A | -2.7157 | |
| 201 | E | A | -3.1311 | |
| 202 | K | A | -3.5478 | |
| 203 | N | A | -2.2999 | |
| 204 | N | A | -1.4008 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | E | A | -1.6090 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -2.2313 | |
| 211 | D | A | -2.9774 | |
| 212 | T | A | -1.5833 | |
| 213 | V | A | -0.7919 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.3575 | |
| 217 | I | A | 0.0000 | |
| 218 | D | A | -0.8024 | |
| 219 | Y | A | -1.3083 | |
| 220 | D | A | -2.5243 | |
| 221 | G | A | -1.7379 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.9275 | |
| 224 | A | A | -1.7300 | |
| 225 | E | A | -1.4200 | |
| 226 | P | A | -0.8492 | |
| 227 | T | A | -0.6822 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | R | A | -0.7381 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -1.2723 | |
| 234 | S | A | -1.0116 | |
| 235 | D | A | -1.5457 | |
| 236 | E | A | -2.0303 | |
| 237 | Y | A | -1.1678 | |
| 238 | E | A | -1.6786 | |
| 239 | K | A | -0.8341 | |
| 240 | S | A | -0.4947 | |
| 241 | Y | A | 0.4198 | |
| 242 | D | A | -0.8896 | |
| 243 | V | A | 0.2393 | |
| 244 | K | A | -1.4941 | |
| 245 | K | A | -1.6305 | |
| 246 | L | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.1998 | |
| 249 | C | A | -0.9841 | |
| 250 | G | A | -0.7281 | |
| 251 | P | A | 0.0585 | |
| 252 | D | A | 0.8411 | |
| 253 | L | A | 2.4222 | |
| 254 | I | A | 2.4421 | |
| 255 | P | A | 0.8021 | |
| 256 | L | A | 0.5640 | |
| 257 | P | A | -0.5158 | |
| 258 | N | A | -1.4605 | |
| 259 | S | A | -1.0860 | |
| 260 | P | A | -1.1242 | |
| 261 | P | A | -1.2468 | |
| 262 | P | A | -1.1976 | |
| 263 | S | A | -1.0448 | |
| 264 | K | A | -0.9680 | |
| 265 | L | A | 0.6305 | |
| 266 | Y | A | -0.0202 | |
| 267 | T | A | -0.8510 | |
| 268 | K | A | -1.4610 | |
| 269 | P | A | -0.4389 | |
| 270 | P | A | -0.5810 | |
| 271 | A | A | -0.0355 | |
| 272 | S | A | 0.0027 | |
| 273 | S | A | 0.3091 | |
| 274 | P | A | 0.7141 | |
| 275 | Y | A | 1.4113 | |
| 276 | A | A | 0.9922 | |
| 277 | V | A | 1.9752 | |
| 278 | L | A | 1.3137 | |
| 279 | P | A | 0.5950 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.6616 | |
| 282 | N | A | 0.3072 | |
| 283 | Y | A | 0.9973 | |
| 284 | F | A | 0.1211 | |
| 285 | T | A | -0.4618 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -0.4357 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -0.6403 | |
| 291 | E | A | -1.6840 | |
| 292 | I | A | -1.1274 | |
| 293 | S | A | -1.9163 | |
| 294 | E | A | -2.6759 | |
| 295 | E | A | -2.8434 | |
| 296 | D | A | -2.0331 | |
| 297 | L | A | -1.1894 | |
| 298 | L | A | -1.0527 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.0323 | |
| 301 | K | A | -1.3970 | |
| 302 | P | A | -0.7195 | |
| 303 | I | A | 0.0866 | |
| 304 | F | A | -0.2809 | |
| 305 | L | A | -0.8666 | |
| 306 | E | A | -2.5949 | |
| 307 | K | A | -3.0197 | |
| 308 | A | A | 0.0000 | |
| 309 | E | A | -2.7307 | |
| 310 | G | A | -1.9916 | |
| 311 | K | A | -1.2236 | |
| 312 | N | A | 0.0000 | |
| 313 | D | A | -1.6209 | |
| 314 | F | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | G | A | -0.8031 | |
| 319 | N | A | -0.8686 | |
| 320 | Q | A | -0.7385 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | D | A | 0.0000 | |
| 332 | E | A | -2.1565 | |
| 333 | I | A | -1.4935 | |
| 334 | E | A | -2.7348 | |
| 335 | E | A | -2.5056 | |
| 336 | I | A | -0.8050 | |
| 337 | R | A | -1.5892 | |
| 338 | T | A | -0.8080 | |
| 339 | R | A | -0.9934 | |
| 340 | I | A | 1.1363 | |
| 341 | S | A | 0.0773 | |
| 342 | T | A | -0.7700 | |
| 343 | P | A | -1.2882 | |
| 344 | E | A | -2.4369 | |
| 345 | E | A | -2.6131 | |
| 346 | N | A | -1.5309 | |
| 347 | V | A | 0.4611 | |
| 348 | Y | A | 0.8188 | |
| 349 | D | A | -0.2610 | |
| 350 | P | A | 0.0421 | |
| 351 | S | A | -0.0454 | |
| 352 | N | A | -0.2688 | |
| 353 | Y | A | 0.2207 | |
| 354 | V | A | 0.9605 | |
| 355 | T | A | -0.3255 | |
| 356 | S | A | -0.4348 | |
| 357 | Y | A | -0.7724 | |
| 358 | R | A | -1.7435 | |
| 359 | Y | A | 0.0000 | |
| 360 | K | A | -2.4526 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.3597 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.4166 | |
| 365 | I | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | -0.3415 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6391 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8885 | |
| 376 | L | A | -0.7741 | |
| 377 | T | A | -0.6977 | |
| 378 | P | A | -1.0202 | |
| 379 | E | A | -1.8326 | |
| 380 | V | A | 0.0000 | |
| 381 | L | A | -0.7514 | |
| 382 | A | A | -1.0645 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -1.5301 | |
| 386 | R | A | -1.3261 | |
| 387 | L | A | -0.6577 | |
| 388 | D | A | -0.8908 | |
| 389 | P | A | -1.2321 | |
| 390 | R | A | -1.7641 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.2801 | |
| 394 | D | A | -2.1210 | |
| 395 | S | A | -1.6278 | |
| 396 | K | A | -1.9545 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.0887 | |
| 399 | F | A | 1.6500 | |
| 400 | V | A | 0.7244 | |
| 401 | P | A | 0.2091 | |
| 402 | P | A | -0.4581 | |
| 403 | V | A | -0.1292 | |
| 404 | E | A | -2.2287 | |
| 405 | R | A | -2.3718 | |
| 406 | P | A | -1.8728 | |
| 407 | D | A | -2.3431 | |
| 408 | P | A | -1.2601 | |
| 409 | L | A | -1.0311 | |
| 410 | A | A | -1.1833 | |
| 411 | G | A | -1.4168 | |
| 412 | K | A | -2.0094 | |
| 413 | K | A | -2.4567 | |
| 414 | F | A | -1.4082 | |
| 415 | I | A | -1.0911 | |
| 416 | E | A | -2.2915 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -3.2554 | |
| 419 | L | A | 0.0000 | |
| 420 | K | A | -3.1072 | |
| 421 | D | A | -3.0072 | |
| 422 | K | A | -2.2443 | |
| 423 | L | A | -0.9766 | |
| 424 | S | A | -0.9621 | |
| 425 | S | A | -0.7750 | |
| 426 | D | A | -1.9676 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.4399 | |
| 429 | K | A | -3.3640 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.5072 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -3.0938 | |
| 435 | E | A | -2.0436 | |
| 436 | Y | A | -1.0473 | |
| 437 | L | A | -0.6991 | |
| 438 | N | A | -1.9888 | |
| 439 | R | A | -2.2175 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine