Project name: C4C4

Status: done

Started: 2025-06-25 14:01:21
Settings
Chain sequence(s) H: DVQLQESGGGLVQPGGSLTLSCAASGFTFSSSQLSWVRRAPGKGLEWISAVTLVSRTHYADSVKGRFTISRDDAKNTLYLQMNSLKPEDTAMYYCVARAAWGTDYREQGYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:34)
Show buried residues

Minimal score value
-2.8517
Maximal score value
1.565
Average score
-0.7437
Total score value
-89.9924

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -2.0229
2 V H -1.0425
3 Q H -1.8108
4 L H 0.0000
5 Q H -1.8573
6 E H -1.3244
7 S H -1.0150
8 G H -0.6999
9 G H -0.3517
11 G H 0.2529
12 L H 1.1355
13 V H -0.0197
14 Q H -1.3706
15 P H -1.6926
16 G H -1.4842
17 G H -0.9795
18 S H -0.8850
19 L H -0.0679
20 T H -0.3069
21 L H 0.0000
22 S H -0.4407
23 C H 0.0000
24 A H -1.1586
25 A H 0.0000
26 S H -1.2092
27 G H -1.1022
28 F H -0.3897
29 T H -0.2516
30 F H 0.0000
35 S H -0.1142
36 S H 0.2149
37 S H -0.0155
38 Q H 0.1223
39 L H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 R H -1.6630
45 A H -1.7359
46 P H -1.5730
47 G H -1.5927
48 K H -2.3591
49 G H -1.2501
50 L H 0.0850
51 E H -0.4422
52 W H 0.2397
53 I H 0.0000
54 S H 0.0000
55 A H 0.0000
56 V H 0.0000
57 T H 0.1227
58 L H 1.3741
59 V H 1.5650
63 S H -0.1179
64 R H -1.4380
65 T H -1.1088
66 H H -1.8093
67 Y H -1.4231
68 A H -1.5825
69 D H -2.6743
70 S H -1.8160
71 V H 0.0000
72 K H -2.8517
74 G H -1.8211
75 R H -1.7586
76 F H 0.0000
77 T H -0.7921
78 I H 0.0000
79 S H -0.6050
80 R H -0.8543
81 D H -1.4732
82 D H -1.8927
83 A H -1.4764
84 K H -2.3753
85 N H -1.9196
86 T H -1.3595
87 L H 0.0000
88 Y H -0.0191
89 L H 0.0000
90 Q H -0.5312
91 M H 0.0000
92 N H -1.2145
93 S H -1.3233
94 L H 0.0000
95 K H -2.7105
96 P H -2.0801
97 E H -2.4995
98 D H 0.0000
99 T H -1.0665
100 A H 0.0000
101 M H -0.5629
102 Y H 0.0000
103 Y H -0.2541
104 C H 0.0000
105 V H 0.0000
106 A H 0.0000
107 R H -1.1143
108 A H -1.0752
109 A H -0.4615
110 W H -0.1266
111 G H -0.4943
111A T H -0.6915
112A D H -1.3797
112 Y H -0.6703
113 R H -1.7653
114 E H -2.5204
115 Q H -2.0423
116 G H -1.4235
117 Y H -0.1926
118 W H 0.1474
119 G H -0.7883
120 Q H -1.5078
121 G H 0.0000
122 T H -0.9276
123 Q H -0.8002
124 V H 0.0000
125 T H -0.2430
126 V H 0.0000
127 S H -0.8268
128 S H -0.5610
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Laboratory of Theory of Biopolymers 2018