| Chain sequence(s) |
A: MDEDTGENFANVFAQSLENCGAFSHEESQEYREIIQVLTRAFGSFPDLQKAPPGVLKATAAGFASAVAERTASDIEQGELFAKTRCVIQALREAFIVTTGVTNPYFISEVERLIEVFYITRGLEHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:10)
[INFO] Main: Simulation completed successfully. (00:03:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.6222 | |
| 2 | D | A | -2.9161 | |
| 3 | E | A | -3.9398 | |
| 4 | D | A | -3.7376 | |
| 5 | T | A | -2.5861 | |
| 6 | G | A | 0.0000 | |
| 7 | E | A | -3.1030 | |
| 8 | N | A | -2.3560 | |
| 9 | F | A | 0.0000 | |
| 10 | A | A | 0.0000 | |
| 11 | N | A | -2.0672 | |
| 12 | V | A | -0.7971 | |
| 13 | F | A | 0.0000 | |
| 14 | A | A | 0.0000 | |
| 15 | Q | A | -2.4148 | |
| 16 | S | A | 0.0000 | |
| 17 | L | A | 0.0000 | |
| 18 | E | A | -2.9788 | |
| 19 | N | A | -2.2714 | |
| 20 | C | A | -1.3933 | |
| 21 | G | A | -1.2256 | |
| 22 | A | A | -1.1334 | |
| 23 | F | A | 0.0000 | |
| 24 | S | A | -1.9805 | |
| 25 | H | A | -3.0814 | |
| 26 | E | A | -3.3295 | |
| 27 | E | A | -3.0827 | |
| 28 | S | A | 0.0000 | |
| 29 | Q | A | -3.0631 | |
| 30 | E | A | -3.1243 | |
| 31 | Y | A | 0.0000 | |
| 32 | R | A | -2.2167 | |
| 33 | E | A | -2.0878 | |
| 34 | I | A | 0.0000 | |
| 35 | I | A | 0.0000 | |
| 36 | Q | A | -0.9919 | |
| 37 | V | A | 0.6368 | |
| 38 | L | A | 0.0000 | |
| 39 | T | A | -0.8055 | |
| 40 | R | A | -1.3260 | |
| 41 | A | A | -0.0140 | |
| 42 | F | A | 0.6024 | |
| 43 | G | A | -0.4011 | |
| 44 | S | A | 0.0000 | |
| 45 | F | A | 0.0000 | |
| 46 | P | A | 0.0000 | |
| 47 | D | A | -0.9266 | |
| 48 | L | A | 0.0000 | |
| 49 | Q | A | -1.7208 | |
| 50 | K | A | -2.3138 | |
| 51 | A | A | -1.3462 | |
| 52 | P | A | -1.0154 | |
| 53 | P | A | -1.0248 | |
| 54 | G | A | -0.7232 | |
| 55 | V | A | -0.1385 | |
| 56 | L | A | 0.0000 | |
| 57 | K | A | -0.8487 | |
| 58 | A | A | -0.2633 | |
| 59 | T | A | 0.0000 | |
| 60 | A | A | 0.0000 | |
| 61 | A | A | -0.3238 | |
| 62 | G | A | 0.0592 | |
| 63 | F | A | 0.0000 | |
| 64 | A | A | 0.0000 | |
| 65 | S | A | -0.4613 | |
| 66 | A | A | -0.8259 | |
| 67 | V | A | 0.0000 | |
| 68 | A | A | 0.0000 | |
| 69 | E | A | -2.1611 | |
| 70 | R | A | -1.8510 | |
| 71 | T | A | 0.0000 | |
| 72 | A | A | -1.6934 | |
| 73 | S | A | -1.6423 | |
| 74 | D | A | -2.2908 | |
| 75 | I | A | -1.9332 | |
| 76 | E | A | -2.8832 | |
| 77 | Q | A | -2.2448 | |
| 78 | G | A | -1.7562 | |
| 79 | E | A | -2.4440 | |
| 80 | L | A | 0.0000 | |
| 81 | F | A | -0.7823 | |
| 82 | A | A | -0.9545 | |
| 83 | K | A | -1.0046 | |
| 84 | T | A | -1.4116 | |
| 85 | R | A | -2.1983 | |
| 86 | C | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | I | A | 0.0000 | |
| 89 | Q | A | -2.1275 | |
| 90 | A | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | R | A | -1.2280 | |
| 93 | E | A | -0.7578 | |
| 94 | A | A | 0.0000 | |
| 95 | F | A | 0.0000 | |
| 96 | I | A | 1.7761 | |
| 97 | V | A | 1.9631 | |
| 98 | T | A | 0.9510 | |
| 99 | T | A | 0.7211 | |
| 100 | G | A | 0.9715 | |
| 101 | V | A | 1.1149 | |
| 102 | T | A | 0.3054 | |
| 103 | N | A | 0.0000 | |
| 104 | P | A | 0.1515 | |
| 105 | Y | A | 0.8276 | |
| 106 | F | A | 0.0000 | |
| 107 | I | A | 0.0000 | |
| 108 | S | A | -0.7859 | |
| 109 | E | A | 0.0000 | |
| 110 | V | A | 0.0000 | |
| 111 | E | A | -2.9045 | |
| 112 | R | A | -2.6095 | |
| 113 | L | A | -1.1690 | |
| 114 | I | A | 0.0000 | |
| 115 | E | A | -1.4463 | |
| 116 | V | A | 0.1821 | |
| 117 | F | A | 0.4400 | |
| 118 | Y | A | 0.4238 | |
| 119 | I | A | 1.7009 | |
| 120 | T | A | 0.6068 | |
| 121 | R | A | -0.5872 | |
| 122 | G | A | -0.2098 | |
| 123 | L | A | -0.1225 | |
| 124 | E | A | -2.5458 | |
| 125 | H | A | -2.8660 | |
| 126 | H | A | -2.8641 | |
| 127 | H | A | -3.0522 | |
| 128 | H | A | -3.0512 | |
| 129 | H | A | -2.9144 | |
| 130 | H | A | -2.1858 |