| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVDGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHETADDRVAFSFDPKQTQLFIVGCEPPTGEHWDRAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPEGHPLPSGPPPSPLYVPPPPGSPYAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9474 | |
| 2 | L | A | 1.9684 | |
| 3 | P | A | 0.6485 | |
| 4 | P | A | 0.3647 | |
| 5 | T | A | 0.1176 | |
| 6 | T | A | 0.1333 | |
| 7 | P | A | 0.1873 | |
| 8 | V | A | 1.2210 | |
| 9 | A | A | 0.0381 | |
| 10 | K | A | -1.1482 | |
| 11 | V | A | -0.3859 | |
| 12 | Q | A | -1.5168 | |
| 13 | S | A | -1.5836 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3739 | |
| 16 | E | A | -2.4166 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4704 | |
| 20 | P | A | 0.1144 | |
| 21 | T | A | 0.1190 | |
| 22 | S | A | -0.1676 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0876 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1606 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7630 | |
| 31 | R | A | -2.6215 | |
| 32 | L | A | -0.7499 | |
| 33 | L | A | 1.1822 | |
| 34 | T | A | 1.3609 | |
| 35 | V | A | 1.7979 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2824 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6428 | |
| 40 | K | A | -1.8878 | |
| 41 | D | A | -0.7850 | |
| 42 | I | A | 1.2493 | |
| 43 | V | A | 2.1477 | |
| 44 | V | A | 1.5000 | |
| 45 | D | A | -0.9891 | |
| 46 | G | A | -0.5772 | |
| 47 | K | A | -0.2507 | |
| 48 | V | A | 2.1396 | |
| 49 | L | A | 2.4874 | |
| 50 | V | A | 1.4486 | |
| 51 | P | A | 0.3173 | |
| 52 | K | A | -0.7269 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1304 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4548 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2895 | |
| 70 | K | A | -1.8067 | |
| 71 | F | A | -0.6614 | |
| 72 | A | A | -0.5836 | |
| 73 | L | A | -0.8809 | |
| 74 | P | A | -1.2683 | |
| 75 | Q | A | -2.4828 | |
| 76 | K | A | -3.1018 | |
| 77 | D | A | -2.9960 | |
| 78 | F | A | -1.6467 | |
| 79 | Y | A | -1.9328 | |
| 80 | D | A | -2.7781 | |
| 81 | P | A | -2.3544 | |
| 82 | E | A | -3.0738 | |
| 83 | K | A | -3.4462 | |
| 84 | E | A | -2.5072 | |
| 85 | R | A | -1.3166 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6340 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9461 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3100 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7274 | |
| 99 | G | A | -0.5337 | |
| 100 | P | A | -0.4141 | |
| 101 | L | A | 0.0224 | |
| 102 | G | A | -0.3045 | |
| 103 | K | A | -0.8186 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4826 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1438 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4050 | |
| 110 | L | A | 0.2715 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1659 | |
| 113 | K | A | -0.6958 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.0257 | |
| 116 | D | A | -1.5088 | |
| 117 | T | A | -1.2536 | |
| 118 | E | A | -2.7077 | |
| 119 | N | A | -2.4250 | |
| 120 | P | A | -1.5161 | |
| 121 | T | A | -0.7127 | |
| 122 | A | A | -0.2461 | |
| 123 | P | A | 0.0308 | |
| 124 | V | A | -0.0192 | |
| 125 | H | A | -0.9839 | |
| 126 | E | A | -2.2352 | |
| 127 | T | A | -1.6888 | |
| 128 | A | A | -1.3627 | |
| 129 | D | A | -2.3236 | |
| 130 | D | A | -1.9303 | |
| 131 | R | A | -1.1056 | |
| 132 | V | A | 0.2299 | |
| 133 | A | A | 0.4272 | |
| 134 | F | A | 0.2617 | |
| 135 | S | A | -0.0725 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7142 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5631 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2623 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 0.7548 | |
| 157 | D | A | -0.5250 | |
| 158 | R | A | -0.9221 | |
| 159 | A | A | -0.6398 | |
| 160 | E | A | -1.8068 | |
| 161 | P | A | -0.4354 | |
| 162 | C | A | 0.1774 | |
| 163 | P | A | -0.1960 | |
| 164 | G | A | -0.1382 | |
| 165 | L | A | 0.4488 | |
| 166 | P | A | -0.1855 | |
| 167 | P | A | -0.3753 | |
| 168 | G | A | -0.4369 | |
| 169 | A | A | -0.0502 | |
| 170 | C | A | 0.5746 | |
| 171 | P | A | 0.1297 | |
| 172 | P | A | 0.3623 | |
| 173 | I | A | 1.4188 | |
| 174 | Q | A | 0.4036 | |
| 175 | L | A | 1.2407 | |
| 176 | V | A | 0.6418 | |
| 177 | N | A | -0.3327 | |
| 178 | S | A | 0.0204 | |
| 179 | V | A | 0.4117 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3737 | |
| 182 | D | A | 0.0811 | |
| 183 | G | A | -0.1627 | |
| 184 | D | A | -0.5811 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1531 | |
| 190 | F | A | 0.0546 | |
| 191 | G | A | -0.1077 | |
| 192 | N | A | -0.3094 | |
| 193 | M | A | -0.3779 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4823 | |
| 197 | E | A | -2.8751 | |
| 198 | L | A | -1.3761 | |
| 199 | Q | A | -2.5038 | |
| 200 | Q | A | -3.3236 | |
| 201 | D | A | -3.5929 | |
| 202 | R | A | -3.3292 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2140 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3749 | |
| 211 | S | A | -1.8857 | |
| 212 | T | A | -1.4854 | |
| 213 | R | A | -2.2656 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1893 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2923 | |
| 220 | L | A | 0.4964 | |
| 221 | K | A | -1.3207 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9653 | |
| 224 | N | A | -1.5751 | |
| 225 | E | A | -1.3161 | |
| 226 | A | A | -0.6584 | |
| 227 | Y | A | -0.4402 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7128 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1422 | |
| 234 | F | A | 0.0255 | |
| 235 | G | A | -0.8817 | |
| 236 | R | A | -2.5849 | |
| 237 | R | A | -2.7345 | |
| 238 | E | A | -2.0144 | |
| 239 | Q | A | -0.0051 | |
| 240 | V | A | 1.5790 | |
| 241 | Y | A | 1.2602 | |
| 242 | A | A | 0.1608 | |
| 243 | R | A | -1.3334 | |
| 244 | H | A | -1.2381 | |
| 245 | F | A | -0.2966 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7006 | |
| 249 | S | A | -1.4373 | |
| 250 | G | A | -1.1529 | |
| 251 | P | A | -1.1170 | |
| 252 | E | A | -1.3717 | |
| 253 | G | A | -1.2778 | |
| 254 | H | A | -1.4712 | |
| 255 | P | A | -0.9671 | |
| 256 | L | A | 0.1621 | |
| 257 | P | A | -0.1603 | |
| 258 | S | A | -0.1790 | |
| 259 | G | A | -0.3713 | |
| 260 | P | A | -0.4164 | |
| 261 | P | A | -0.0883 | |
| 262 | P | A | 0.0394 | |
| 263 | S | A | 0.5008 | |
| 264 | P | A | 0.6709 | |
| 265 | L | A | 1.8411 | |
| 266 | Y | A | 1.6843 | |
| 267 | V | A | 1.9040 | |
| 268 | P | A | 0.9134 | |
| 269 | P | A | 0.6025 | |
| 270 | P | A | -0.2183 | |
| 271 | P | A | -0.5292 | |
| 272 | G | A | -0.3769 | |
| 273 | S | A | 0.0846 | |
| 274 | P | A | 0.4638 | |
| 275 | Y | A | 1.4996 | |
| 276 | A | A | 1.2355 | |
| 277 | V | A | 2.1800 | |
| 278 | L | A | 1.5760 | |
| 279 | P | A | 0.3627 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.3245 | |
| 282 | D | A | -0.9271 | |
| 283 | Y | A | 0.8339 | |
| 284 | F | A | 0.6847 | |
| 285 | G | A | 0.1123 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8260 | |
| 291 | L | A | 1.6100 | |
| 292 | V | A | 0.5656 | |
| 293 | S | A | -0.1609 | |
| 294 | S | A | -0.9674 | |
| 295 | D | A | -1.8438 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0844 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6075 | |
| 301 | R | A | -1.8151 | |
| 302 | P | A | -0.9302 | |
| 303 | F | A | -0.1679 | |
| 304 | W | A | -0.5064 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0785 | |
| 307 | R | A | -2.9175 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6562 | |
| 310 | G | A | -1.4226 | |
| 311 | N | A | -1.3838 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8839 | |
| 319 | N | A | -0.9757 | |
| 320 | E | A | -1.0439 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3830 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1346 | |
| 333 | N | A | 0.5253 | |
| 334 | F | A | 1.7598 | |
| 335 | T | A | 0.8853 | |
| 336 | I | A | 0.4831 | |
| 337 | S | A | -0.8287 | |
| 338 | Q | A | -1.4939 | |
| 339 | Q | A | -0.8685 | |
| 340 | L | A | 0.7999 | |
| 341 | C | A | 0.4422 | |
| 342 | T | A | 0.1556 | |
| 343 | P | A | -0.2787 | |
| 344 | A | A | 0.1076 | |
| 345 | P | A | 0.1640 | |
| 346 | N | A | -0.2720 | |
| 347 | V | A | 1.5537 | |
| 348 | Y | A | 1.4705 | |
| 349 | D | A | 0.1036 | |
| 350 | P | A | -0.3098 | |
| 351 | S | A | -0.2499 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5228 | |
| 354 | K | A | -1.6607 | |
| 355 | N | A | -1.6938 | |
| 356 | Y | A | -0.0586 | |
| 357 | L | A | 0.6580 | |
| 358 | R | A | 0.9563 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3731 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0317 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9331 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6752 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3047 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3246 | |
| 376 | L | A | -1.7609 | |
| 377 | D | A | -2.0478 | |
| 378 | P | A | -1.0714 | |
| 379 | G | A | -1.0294 | |
| 380 | V | A | -0.9403 | |
| 381 | L | A | -0.5516 | |
| 382 | A | A | -0.6675 | |
| 383 | H | A | -0.8526 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4068 | |
| 386 | T | A | -0.5753 | |
| 387 | M | A | -0.3292 | |
| 388 | N | A | -0.8691 | |
| 389 | P | A | -1.2657 | |
| 390 | T | A | -1.5002 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4996 | |
| 393 | E | A | -2.8681 | |
| 394 | N | A | -2.5936 | |
| 395 | W | A | -1.4668 | |
| 396 | N | A | -1.1281 | |
| 397 | L | A | -0.1924 | |
| 398 | G | A | 0.5426 | |
| 399 | F | A | 2.4281 | |
| 400 | V | A | 1.8611 | |
| 401 | P | A | 0.0598 | |
| 402 | P | A | -1.8974 | |
| 403 | K | A | -3.3808 | |
| 404 | E | A | -3.8193 | |
| 405 | R | A | -4.0476 | |
| 406 | E | A | -3.8092 | |
| 407 | D | A | -2.8569 | |
| 408 | P | A | -1.7549 | |
| 409 | Y | A | -0.9808 | |
| 410 | K | A | -2.0915 | |
| 411 | G | A | -0.6268 | |
| 412 | L | A | 0.6698 | |
| 413 | I | A | 1.5812 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4003 | |
| 416 | E | A | -1.6735 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8470 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8880 | |
| 421 | E | A | -2.4944 | |
| 422 | R | A | -2.0538 | |
| 423 | F | A | -1.0108 | |
| 424 | S | A | -1.3078 | |
| 425 | Q | A | -1.8375 | |
| 426 | D | A | -2.8975 | |
| 427 | L | A | -2.0064 | |
| 428 | D | A | -2.8336 | |
| 429 | Q | A | -2.6320 | |
| 430 | F | A | -1.4423 | |
| 431 | A | A | -0.8955 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5668 | |
| 435 | K | A | -0.7079 | |
| 436 | F | A | 0.1641 | |
| 437 | L | A | 1.0373 | |
| 438 | Y | A | 0.8322 | |
| 439 | Q | A | -0.2623 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine