| Chain sequence(s) |
A: MSHHHHHHSGVLAEFLSLVRQLEELMDKFYKVFRRWKGTKSTDDRDEIYTVLEKMKQSLNKMAALLKAENSDSEESGKTGMEDFFKAYKVPESTQKHVRDTMNEVGWDMIYYHPYFENDAPIRQLMTEIFKILVQNFEFDPRKSGMFIWDDGYSIKAWNNFKELQKKLNIPNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:41)
[INFO] Main: Simulation completed successfully. (00:07:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.0967 | |
| 2 | S | A | -1.1139 | |
| 3 | H | A | -2.1335 | |
| 4 | H | A | -2.4293 | |
| 5 | H | A | -2.5951 | |
| 6 | H | A | -2.6806 | |
| 7 | H | A | -2.5144 | |
| 8 | H | A | -1.7737 | |
| 9 | S | A | -1.4712 | |
| 10 | G | A | -1.3002 | |
| 11 | V | A | -0.5672 | |
| 12 | L | A | -0.4365 | |
| 13 | A | A | -0.5642 | |
| 14 | E | A | -1.5576 | |
| 15 | F | A | 0.0000 | |
| 16 | L | A | -0.7370 | |
| 17 | S | A | -1.4128 | |
| 18 | L | A | 0.0000 | |
| 19 | V | A | 0.0000 | |
| 20 | R | A | -3.2636 | |
| 21 | Q | A | -2.9154 | |
| 22 | L | A | 0.0000 | |
| 23 | E | A | -3.7862 | |
| 24 | E | A | -3.8873 | |
| 25 | L | A | 0.0000 | |
| 26 | M | A | 0.0000 | |
| 27 | D | A | -2.9606 | |
| 28 | K | A | -2.5083 | |
| 29 | F | A | 0.0000 | |
| 30 | Y | A | -1.6221 | |
| 31 | K | A | -2.4170 | |
| 32 | V | A | 0.0000 | |
| 33 | F | A | 0.0000 | |
| 34 | R | A | -3.4936 | |
| 35 | R | A | -3.8022 | |
| 36 | W | A | -3.4275 | |
| 37 | K | A | -3.1612 | |
| 38 | G | A | -2.5548 | |
| 39 | T | A | -2.4765 | |
| 40 | K | A | -2.9076 | |
| 41 | S | A | -2.3960 | |
| 42 | T | A | -2.0123 | |
| 43 | D | A | -2.9284 | |
| 44 | D | A | -3.1204 | |
| 45 | R | A | -2.5505 | |
| 46 | D | A | -2.3909 | |
| 47 | E | A | -2.3847 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | -1.3840 | |
| 50 | T | A | -1.5433 | |
| 51 | V | A | 0.0000 | |
| 52 | L | A | 0.0000 | |
| 53 | E | A | -2.8295 | |
| 54 | K | A | -2.7255 | |
| 55 | M | A | 0.0000 | |
| 56 | K | A | -2.3138 | |
| 57 | Q | A | -2.7960 | |
| 58 | S | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | N | A | -1.7882 | |
| 61 | K | A | -1.7846 | |
| 62 | M | A | 0.0000 | |
| 63 | A | A | 0.0000 | |
| 64 | A | A | -1.0109 | |
| 65 | L | A | -0.8012 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.0837 | |
| 68 | A | A | -1.2623 | |
| 69 | E | A | -1.4220 | |
| 70 | N | A | -2.5963 | |
| 71 | S | A | -2.3278 | |
| 72 | D | A | -2.9344 | |
| 73 | S | A | -2.8299 | |
| 74 | E | A | -3.2882 | |
| 75 | E | A | -3.5009 | |
| 76 | S | A | -2.5535 | |
| 77 | G | A | -2.1891 | |
| 78 | K | A | -2.7768 | |
| 79 | T | A | -1.9800 | |
| 80 | G | A | -1.8668 | |
| 81 | M | A | 0.0000 | |
| 82 | E | A | -2.1700 | |
| 83 | D | A | -2.3496 | |
| 84 | F | A | 0.0000 | |
| 85 | F | A | 0.0000 | |
| 86 | K | A | -2.7251 | |
| 87 | A | A | -1.5867 | |
| 88 | Y | A | -1.4231 | |
| 89 | K | A | -2.5852 | |
| 90 | V | A | 0.0000 | |
| 91 | P | A | -2.1923 | |
| 92 | E | A | -2.9470 | |
| 93 | S | A | -2.1313 | |
| 94 | T | A | -2.0186 | |
| 95 | Q | A | -3.0169 | |
| 96 | K | A | -3.5447 | |
| 97 | H | A | -3.0294 | |
| 98 | V | A | 0.0000 | |
| 99 | R | A | -2.6616 | |
| 100 | D | A | -3.3626 | |
| 101 | T | A | 0.0000 | |
| 102 | M | A | 0.0000 | |
| 103 | N | A | -2.0899 | |
| 104 | E | A | -2.1066 | |
| 105 | V | A | 0.0000 | |
| 106 | G | A | 0.0000 | |
| 107 | W | A | -0.0199 | |
| 108 | D | A | 0.0000 | |
| 109 | M | A | 0.0000 | |
| 110 | I | A | 0.7609 | |
| 111 | Y | A | 0.9635 | |
| 112 | Y | A | 0.2807 | |
| 113 | H | A | -0.6195 | |
| 114 | P | A | -0.7174 | |
| 115 | Y | A | -0.4965 | |
| 116 | F | A | 0.0000 | |
| 117 | E | A | -2.5668 | |
| 118 | N | A | -2.2718 | |
| 119 | D | A | -1.7500 | |
| 120 | A | A | -1.3397 | |
| 121 | P | A | -0.8697 | |
| 122 | I | A | 0.0000 | |
| 123 | R | A | -1.8199 | |
| 124 | Q | A | -1.6325 | |
| 125 | L | A | 0.0000 | |
| 126 | M | A | 0.0000 | |
| 127 | T | A | -0.9558 | |
| 128 | E | A | -1.2122 | |
| 129 | I | A | 0.0000 | |
| 130 | F | A | -0.3764 | |
| 131 | K | A | -1.2218 | |
| 132 | I | A | -0.8606 | |
| 133 | L | A | 0.0000 | |
| 134 | V | A | -0.4658 | |
| 135 | Q | A | -1.3076 | |
| 136 | N | A | -1.1596 | |
| 137 | F | A | 0.0000 | |
| 138 | E | A | -1.1274 | |
| 139 | F | A | 0.0000 | |
| 140 | D | A | -1.8281 | |
| 141 | P | A | -1.5639 | |
| 142 | R | A | -2.6004 | |
| 143 | K | A | -2.6593 | |
| 144 | S | A | 0.0000 | |
| 145 | G | A | -0.6419 | |
| 146 | M | A | -0.2903 | |
| 147 | F | A | 0.3917 | |
| 148 | I | A | 1.1060 | |
| 149 | W | A | 1.1235 | |
| 150 | D | A | -0.7430 | |
| 151 | D | A | -0.3958 | |
| 152 | G | A | -0.0418 | |
| 153 | Y | A | 0.8163 | |
| 154 | S | A | 0.0000 | |
| 155 | I | A | 0.2314 | |
| 156 | K | A | -1.2488 | |
| 157 | A | A | -0.4686 | |
| 158 | W | A | 0.0390 | |
| 159 | N | A | -1.5822 | |
| 160 | N | A | -1.7785 | |
| 161 | F | A | -0.1505 | |
| 162 | K | A | -2.3868 | |
| 163 | E | A | -2.5892 | |
| 164 | L | A | -0.5414 | |
| 165 | Q | A | -1.4344 | |
| 166 | K | A | -2.8712 | |
| 167 | K | A | -1.9907 | |
| 168 | L | A | -0.1899 | |
| 169 | N | A | -1.3411 | |
| 170 | I | A | -0.2547 | |
| 171 | P | A | -0.8370 | |
| 172 | N | A | -1.8465 | |
| 173 | S | A | -0.7545 |