| Chain sequence(s) |
A: CMANQFKCRSSRTCLLPGWVCDGIDDCPDGSDESPVTCPTPT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:20)
[INFO] Main: Simulation completed successfully. (00:00:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.4739 | |
| 2 | M | A | 0.8983 | |
| 3 | A | A | -0.0391 | |
| 4 | N | A | -0.8312 | |
| 5 | Q | A | -0.1229 | |
| 6 | F | A | -0.6291 | |
| 7 | K | A | -2.1337 | |
| 8 | C | A | 0.0000 | |
| 9 | R | A | -2.8063 | |
| 10 | S | A | -1.9579 | |
| 11 | S | A | 0.0000 | |
| 12 | R | A | -2.4386 | |
| 13 | T | A | -1.4823 | |
| 14 | C | A | -0.6025 | |
| 15 | L | A | 0.0000 | |
| 16 | L | A | 0.5490 | |
| 17 | P | A | -0.2603 | |
| 18 | G | A | -0.1500 | |
| 19 | W | A | 0.2276 | |
| 20 | V | A | -0.1034 | |
| 21 | C | A | -0.4136 | |
| 22 | D | A | -1.3833 | |
| 23 | G | A | -0.6857 | |
| 24 | I | A | 0.1317 | |
| 25 | D | A | -1.7160 | |
| 26 | D | A | -1.2332 | |
| 27 | C | A | 0.0000 | |
| 28 | P | A | -1.3793 | |
| 29 | D | A | -1.6140 | |
| 30 | G | A | -1.3495 | |
| 31 | S | A | 0.0000 | |
| 32 | D | A | 0.0000 | |
| 33 | E | A | -0.5787 | |
| 34 | S | A | -0.0015 | |
| 35 | P | A | 0.4906 | |
| 36 | V | A | 1.5122 | |
| 37 | T | A | 0.8149 | |
| 38 | C | A | 0.1529 | |
| 39 | P | A | 0.0866 | |
| 40 | T | A | -0.1239 | |
| 41 | P | A | -0.3813 | |
| 42 | T | A | -0.2497 |