Project name: query_structure

Status: done

Started: 2026-03-17 01:07:31
Settings
Chain sequence(s) A: YLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTWIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFWYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSL
B: VQLVESGGGLVQAGDSLRLSCAASGGTFSTFNMGWFRQDLGKEREFVAAIRWTGGRAYYGDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCARQGTNGGGYSEATSYNYWGQGTQVTVSSH
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:20)
Show buried residues

Minimal score value
-3.1599
Maximal score value
3.0907
Average score
0.0761
Total score value
39.648

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
3 Y A 1.0233
4 L A 1.1439
5 K A -0.7621
6 N A -0.5897
7 T A -0.2038
8 N A -0.4361
9 F A 0.0000
10 W A 1.1680
11 M A 1.1156
12 F A 0.0000
13 G A 0.0000
14 L A 0.9791
15 F A 0.0000
16 F A 0.0000
17 F A 0.9545
18 F A 0.9600
19 Y A 0.0000
20 F A 0.0000
21 F A 0.0000
22 I A 0.0000
23 M A 0.0000
24 G A 0.0000
25 A A 0.0000
26 Y A 0.0000
27 F A 1.1617
28 P A 0.6558
29 F A 0.7051
30 F A 0.0000
31 P A -0.1341
32 I A -0.0544
33 W A 0.1426
34 L A 0.0000
35 H A -1.3796
36 D A -1.5773
37 I A 0.0465
38 N A -0.7105
39 H A -1.6159
40 I A 0.0000
41 S A -1.6667
42 K A -2.3491
43 S A -1.2646
44 D A -0.9390
45 T A -0.2234
46 W A 0.7667
47 I A 1.3537
48 I A 0.0000
49 F A 1.2507
50 A A 1.2938
51 A A 0.0000
52 I A 0.0000
53 S A 1.3051
54 L A 2.0305
55 F A 1.7800
56 S A 0.0000
57 L A 1.7070
58 L A 2.1259
59 F A 1.6954
60 Q A 0.0000
61 P A 1.2546
62 L A 1.5661
63 F A 0.0000
64 G A 0.0000
65 L A 0.5620
66 L A 0.3032
67 S A 0.0000
68 D A 0.0000
69 K A -1.3382
70 L A -0.5209
71 G A -0.6907
72 L A -0.7263
73 R A -0.7419
74 K A 0.3377
75 Y A 1.4997
76 L A 0.0000
77 L A 0.0000
78 W A 1.5043
79 I A 1.3235
80 I A 0.0000
81 T A 0.0000
82 G A 0.7761
83 M A 0.7545
84 L A 0.0000
85 V A 1.3837
86 M A 0.7952
87 F A 0.0000
88 A A 0.0000
89 P A 1.1853
90 F A 0.0000
91 F A 0.0000
92 I A 1.4995
93 F A 2.4229
94 I A 1.7759
95 F A 0.0000
96 G A 0.0000
97 P A 0.6233
98 L A 1.3587
99 L A 0.0000
100 Q A -0.8745
101 Y A 0.7547
102 N A 0.2212
103 I A 1.2159
104 L A 2.7113
105 V A 2.7504
106 G A 0.0000
107 S A 0.0000
108 I A 2.8989
109 V A 1.8571
110 G A 0.0000
111 G A 0.0000
112 I A 1.6642
113 Y A 0.0000
114 L A 0.0000
115 G A 0.0000
116 F A 0.7267
117 C A 0.0000
118 F A 0.0000
119 N A 0.1218
120 A A 0.0000
121 G A 0.0000
122 A A 0.0000
123 P A 0.0000
124 A A 0.0000
125 V A 0.0000
126 E A 0.0000
127 A A 0.0000
128 F A 0.0000
129 I A 0.0000
130 E A 0.0000
131 K A 0.0000
132 V A 0.0000
133 S A 0.0000
134 R A -3.0935
135 R A -3.1599
136 S A -2.3806
137 N A -2.4231
138 F A 0.0000
139 E A -0.4951
140 F A 0.0000
141 G A 0.0000
142 R A 0.7278
143 A A 0.0000
144 R A 0.2562
145 M A 0.7858
146 F A 1.1946
147 G A 0.0000
148 C A 0.0000
149 V A 1.3200
150 G A 0.0000
151 W A 0.8660
152 A A 0.0000
153 L A 1.1624
154 C A 0.0000
155 A A 0.0000
156 S A 1.2574
157 I A 1.4589
158 V A 0.0000
159 G A 1.3948
160 I A 2.4940
161 M A 1.8012
162 F A 1.4405
163 T A 1.2627
164 I A 1.8882
165 N A 0.0228
166 N A 0.3966
167 Q A -0.0167
168 F A 0.9803
169 V A 0.0000
170 F A 0.0000
171 W A 1.3074
172 L A 1.1098
173 G A 0.0000
174 S A 1.1064
175 G A 1.0330
176 C A 0.0000
177 A A 0.0000
178 L A 2.3006
179 I A 2.3442
180 L A 0.0000
181 A A 2.3269
182 V A 3.0907
183 L A 0.0000
184 L A 0.0000
185 F A 3.0502
186 F A 2.4617
187 A A 0.0000
188 K A -1.1975
189 T A -1.4221
190 D A -1.7867
191 A A -1.0038
192 P A -0.5622
193 S A -0.6211
194 S A -0.5645
205 H A -1.0489
206 S A -0.7308
207 A A -0.5756
208 F A -0.4892
209 S A -0.1808
210 L A 0.2960
211 K A -0.6902
212 L A 0.6328
213 A A 0.0000
214 L A 0.9112
215 E A -0.3942
216 L A 0.0000
217 F A 0.9951
218 R A -1.2599
219 Q A -0.8778
220 P A -0.3625
221 K A -0.4112
222 L A 0.0000
223 W A 1.2406
224 F A 1.4234
225 L A 0.0000
226 S A 0.9893
227 L A 1.2809
228 Y A 0.0000
229 V A 0.0000
230 I A 0.7621
231 G A 0.0000
232 V A 0.0000
233 S A 0.0000
234 C A 0.0000
235 T A 0.0000
236 Y A 0.0000
237 D A -0.9120
238 V A 0.0000
239 F A 0.0000
240 D A -1.2301
241 Q A -1.4238
242 Q A -1.2885
243 F A 0.0000
244 A A -0.5967
245 N A -0.9698
246 F A 0.0000
247 F A 0.0000
248 T A 0.0000
249 S A 0.0000
250 F A 0.0000
251 F A 0.0000
252 A A -0.4473
253 T A -0.9210
254 G A 0.0000
255 E A -2.5676
256 Q A -2.0019
257 G A 0.0000
258 T A -1.3957
259 R A -1.9924
260 V A -0.3730
261 F A 0.0225
262 W A 0.3059
263 Y A 1.0364
264 V A 0.0000
265 T A 0.0000
266 T A 0.0000
267 M A 1.7884
268 G A 0.0000
269 E A 1.1033
270 L A 1.4894
271 L A 1.2880
272 N A 0.0000
273 A A 0.0000
274 S A 1.1777
275 I A 1.5187
276 M A 0.0000
277 F A 1.9419
278 F A 2.6046
279 A A 0.0000
280 P A 0.0000
281 L A 0.6546
282 I A 0.4039
283 I A 0.0000
284 N A -1.7951
285 R A -1.9566
286 I A -0.4668
287 G A -0.9267
288 G A -0.7390
289 K A 0.0000
290 N A 0.2441
291 A A 0.0000
292 L A 0.0000
293 L A 0.0000
294 L A 0.8774
295 A A 0.0000
296 G A 0.0000
297 T A 1.0156
298 I A 1.3058
299 M A 0.0000
300 S A 0.0000
301 V A 1.9698
302 R A 0.0000
303 I A 0.0000
304 I A 1.9702
305 G A 1.2693
306 S A 0.0000
307 S A 0.0000
308 F A 1.6770
309 A A 0.0000
310 T A 0.1148
311 S A 0.2448
312 A A 0.8730
313 L A 1.7293
314 E A 0.8478
315 V A 0.0000
316 V A 1.6067
317 I A 2.1239
318 L A 0.0000
319 K A 0.0000
320 T A 1.1744
321 L A 1.3243
322 H A 0.6963
323 M A 0.0000
324 F A 1.3747
325 E A 0.0000
326 V A 0.7169
327 P A 0.0000
328 F A 0.8321
329 L A 0.6436
330 L A 0.3095
331 V A 0.0000
332 G A 0.0000
333 C A 0.0000
334 F A 0.0000
335 K A -0.7113
336 Y A 0.0000
337 I A 0.0000
338 T A -0.6410
339 S A -0.6331
340 Q A -0.8440
341 F A 0.0000
342 E A -1.4199
343 V A -0.2573
344 R A -0.8874
345 F A 0.0000
346 S A 0.0000
347 A A 0.0000
348 T A 0.0000
349 I A 0.0000
350 Y A 0.0000
351 L A 0.0000
352 V A 0.8446
353 C A 0.0000
354 F A 0.0000
355 C A 0.5335
356 F A 1.2085
357 F A 1.2310
358 K A 0.5548
359 Q A 0.0000
360 L A 1.4684
361 A A 1.3032
362 M A 1.4842
363 I A 2.1596
364 F A 3.0311
365 M A 2.1192
366 S A 1.4346
367 V A 2.0644
368 L A 2.1836
369 A A 0.0000
370 G A -0.1810
371 N A -1.1618
372 M A -0.3551
373 Y A 0.0000
374 E A -2.1357
375 S A -1.0294
376 I A 0.0107
377 G A 0.0000
378 F A 0.0000
379 Q A 0.0000
380 G A 0.9249
381 A A 0.0000
382 Y A 0.0000
383 L A 2.0204
384 V A 2.5435
385 L A 0.0000
386 G A 0.0000
387 L A 2.9127
388 V A 2.1883
389 A A 0.0000
390 L A 2.2583
391 G A 1.7636
392 F A 1.9833
393 T A 0.0000
394 L A 2.6220
395 I A 2.7561
396 S A 0.0000
397 V A 2.0903
398 F A 2.6561
399 T A 1.6558
400 L A 0.0000
401 S A -0.0311
402 G A -0.3383
403 P A 0.2183
404 G A 0.0000
405 P A 0.9676
406 L A 1.8087
407 S A 1.2104
408 L A 1.9322
2 V B 0.1544
3 Q B -0.4983
4 L B 0.0000
5 V B 1.1333
6 E B 0.2053
7 S B -0.4144
8 G B -1.3741
9 G B -0.9136
10 G B 0.0563
11 L B 0.8975
12 V B -0.3702
13 Q B -1.8090
14 A B -2.0159
15 G B -1.9438
16 D B -2.1704
17 S B -1.8676
18 L B 0.0000
19 R B -2.5025
20 L B 0.0000
21 S B -0.5603
22 C B 0.0000
23 A B -0.0826
24 A B -0.0842
25 S B -0.2463
26 G B -0.5625
27 G B -0.2897
28 T B -0.5002
29 F B 0.0000
30 S B -0.0806
31 T B 0.0000
32 F B 0.0000
33 N B 0.0000
34 M B 0.0000
35 G B 0.0000
36 W B 0.0000
37 F B 0.0000
38 R B 0.0000
39 Q B -1.6807
40 D B -1.6392
41 L B 0.2402
42 G B -1.3319
43 K B -2.9681
44 E B -3.1423
45 R B -2.3350
46 E B -1.9292
47 F B -0.7640
48 V B 0.0000
49 A B 0.0000
50 A B 0.0000
51 I B 0.0000
52 R B 0.0000
53 W B -0.3995
54 T B -0.1614
55 G B -0.5217
56 G B -1.0396
57 R B -1.2315
58 A B -0.4902
59 Y B -0.1014
60 Y B -0.6409
61 G B -1.4463
62 D B -2.4762
63 S B -1.9106
64 V B 0.0000
65 K B -2.6378
66 G B -1.8385
67 R B -1.5064
68 F B 0.0000
69 T B -0.9274
70 I B 0.0000
71 S B -0.6810
72 R B -1.2740
73 D B -2.1004
74 N B -2.3337
75 A B -1.6995
76 K B -2.4689
77 N B -1.8249
78 T B 0.0000
79 V B 0.0000
80 Y B -0.7320
81 L B 0.0000
82 Q B -1.6293
83 M B 0.0000
84 N B -1.8647
85 S B -1.6218
86 L B 0.0000
87 K B -2.6090
88 P B -1.9605
89 E B -2.4560
90 D B 0.0000
91 T B -0.9218
92 A B 0.0000
93 V B -0.6080
94 Y B 0.0000
95 Y B -0.1449
96 C B 0.0000
97 A B 0.0000
98 R B 0.0000
99 Q B 0.0000
100 G B 0.0000
101 T B -1.2505
102 N B -1.5260
103 G B -1.0505
104 G B -0.9556
105 G B 0.0000
106 Y B 0.0193
107 S B -0.2470
108 E B -0.6869
109 A B -0.7975
110 T B -0.5822
111 S B 0.0000
112 Y B 0.0000
113 N B -0.8877
114 Y B -0.1675
115 W B 0.0504
116 G B -0.1695
117 Q B -0.8654
118 G B 0.0000
119 T B 0.0000
120 Q B -1.1568
121 V B 0.0000
122 T B -0.3693
123 V B 0.0000
124 S B -1.1818
125 S B -1.3433
126 H B -1.3640
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Laboratory of Theory of Biopolymers 2018