Project name: 5DWU

Status: done

Started: 2026-03-29 09:51:21
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Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGFTFPWYRVHWVRQAPGKGLEWVSSIRSSGGFPYYNYKVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARFYDSFFDIWGQGTMVTVSS
L: DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPITFGQGTRLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:57)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:58)
Show buried residues

Minimal score value
-2.7287
Maximal score value
1.2617
Average score
-0.5077
Total score value
-113.7167

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9938
2 V H -1.0291
3 Q H -0.9583
4 L H 0.0000
5 L H 0.7077
6 E H 0.0000
7 S H -0.3741
8 G H -0.5826
9 G H -0.1233
11 G H 0.4036
12 L H 1.2412
13 V H 0.0102
14 Q H -1.2899
15 P H -1.5235
16 G H -1.3651
17 G H -1.1103
18 S H -1.1062
19 L H -0.7418
20 R H -1.6385
21 L H 0.0000
22 S H -0.3305
23 C H 0.0000
24 A H -0.1895
25 A H 0.0000
26 S H -0.7633
27 G H -1.1096
28 F H -0.2195
29 T H 0.2268
30 F H 0.0000
35 P H -0.2737
36 W H 0.8934
37 Y H 0.2886
38 R H -0.5921
39 V H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6548
45 A H -1.0860
46 P H -0.9164
47 G H -1.4755
48 K H -2.3084
49 G H -1.5085
50 L H 0.0000
51 E H -0.7710
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 S H 0.0000
56 I H 0.0000
57 R H -1.4489
58 S H -0.6660
59 S H -0.6986
62 G H -0.9139
63 G H -0.4743
64 F H 0.3395
65 P H 0.0524
66 Y H 0.3508
67 Y H 0.0590
68 N H 0.0000
69 Y H 0.3125
70 K H -0.6076
71 V H 0.0000
72 K H -1.5767
74 G H -1.3353
75 R H -1.1728
76 F H 0.0000
77 T H -0.7655
78 I H 0.0000
79 S H -0.4701
80 R H -1.1664
81 D H -1.4504
82 N H -1.4540
83 S H -1.5395
84 K H -2.3473
85 N H -1.7414
86 T H -0.9985
87 L H 0.0000
88 Y H -0.4191
89 L H 0.0000
90 Q H -0.9983
91 M H 0.0000
92 N H -1.2626
93 S H -1.1884
94 L H 0.0000
95 R H -2.0010
96 A H -1.5371
97 E H -2.1642
98 D H 0.0000
99 T H -0.4454
100 A H 0.0000
101 V H 0.3568
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0047
107 F H -0.0095
108 Y H 0.2849
109 D H -1.2108
113 S H -0.3894
114 F H 0.1935
115 F H 0.0000
116 D H -0.1463
117 I H 0.1429
118 W H 0.0000
119 G H 0.0000
120 Q H -1.3514
121 G H -0.5437
122 T H 0.0464
123 M H 0.5278
124 V H 0.0000
125 T H 0.1597
126 V H 0.0000
127 S H -0.5181
128 S H -0.6669
1 D L -1.8608
2 I L -1.6214
3 Q L -2.2098
4 M L 0.0000
5 T L -1.3723
6 Q L 0.0000
7 S L -0.7531
8 P L -0.6242
9 S L -0.9491
10 S L -0.9431
11 V L -0.4605
12 S L -0.5011
13 A L 0.0000
14 S L -0.0513
15 V L 0.6946
16 G L -0.5381
17 D L -1.5940
18 R L -2.1932
19 V L 0.0000
20 T L -0.5799
21 I L 0.0000
22 T L -0.7864
23 C L 0.0000
24 R L -2.7287
25 A L 0.0000
26 S L -1.9697
27 Q L -2.3331
28 G L -1.5441
29 I L 0.0000
36 S L -0.6159
37 S L -0.1347
38 W L 0.5628
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.9943
44 Q L 0.0000
45 K L -1.8923
46 P L -1.3113
47 G L -1.7009
48 K L -2.6298
49 A L -1.6565
50 P L 0.0000
51 K L -1.5520
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.3421
56 A L 0.3642
57 A L 0.0000
65 S L -0.1414
66 S L 0.1018
67 L L 0.2868
68 Q L -0.2899
69 S L -0.4336
70 G L -0.5885
71 V L 0.0000
72 P L -0.4309
74 S L -0.4575
75 R L -0.8457
76 F L 0.0000
77 S L -0.3602
78 G L -0.2356
79 S L -0.6198
80 G L -1.0365
83 S L -0.9476
84 G L -1.2011
85 T L -1.7808
86 D L -1.9786
87 F L 0.0000
88 T L -0.6928
89 L L 0.0000
90 T L -0.6050
91 I L 0.0000
92 S L -1.3530
93 S L -1.1220
94 L L 0.0000
95 Q L -0.7281
96 P L -0.5149
97 E L -1.7089
98 D L 0.0000
99 F L -0.3097
100 A L 0.0000
101 T L -1.0826
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 A L 0.0129
108 N L -0.3571
109 S L -0.0631
114 F L 0.5625
115 P L 0.3086
116 I L 0.0000
117 T L -0.6631
118 F L 0.0000
119 G L 0.0000
120 Q L -1.6570
121 G L 0.0000
122 T L 0.0000
123 R L -1.9120
124 L L 0.0000
125 E L -0.2028
126 I L 1.2617
127 K L -0.6810
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Laboratory of Theory of Biopolymers 2018