| Chain sequence(s) |
A: GFGCPNNYQCHRHCKSIPGRCGGYCGGWHRLRCTCYRCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:29)
[INFO] Main: Simulation completed successfully. (00:00:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1563 | |
| 2 | F | A | 0.8308 | |
| 3 | G | A | -0.4047 | |
| 4 | C | A | -0.8417 | |
| 5 | P | A | -1.2694 | |
| 6 | N | A | -1.4883 | |
| 7 | N | A | -1.2607 | |
| 8 | Y | A | -0.3389 | |
| 9 | Q | A | -1.3804 | |
| 10 | C | A | 0.0000 | |
| 11 | H | A | -1.4305 | |
| 12 | R | A | -2.5092 | |
| 13 | H | A | -1.3906 | |
| 14 | C | A | 0.0000 | |
| 15 | K | A | -2.6844 | |
| 16 | S | A | -1.5850 | |
| 17 | I | A | -1.2144 | |
| 18 | P | A | -1.0953 | |
| 19 | G | A | -1.4389 | |
| 20 | R | A | -1.7597 | |
| 21 | C | A | -1.1050 | |
| 22 | G | A | 0.0000 | |
| 23 | G | A | -0.2133 | |
| 24 | Y | A | 0.3549 | |
| 25 | C | A | -0.7761 | |
| 26 | G | A | -1.1573 | |
| 27 | G | A | -1.0846 | |
| 28 | W | A | -0.9122 | |
| 29 | H | A | -1.7809 | |
| 30 | R | A | -2.4264 | |
| 31 | L | A | -1.1326 | |
| 32 | R | A | -1.2369 | |
| 33 | C | A | -0.6441 | |
| 34 | T | A | 0.3222 | |
| 35 | C | A | -0.0048 | |
| 36 | Y | A | 0.3172 | |
| 37 | R | A | -1.5947 | |
| 38 | C | A | -0.7270 | |
| 39 | G | A | -0.6998 |