Project name: query_structure

Status: done

Started: 2026-03-16 23:20:22
Settings
Chain sequence(s) A: GFGCPNNYQCHRHCKSIPGRCGGYCGGWHRLRCTCYRCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:29)
Show buried residues

Minimal score value
-2.6844
Maximal score value
0.8308
Average score
-0.921
Total score value
-35.919

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1563
2 F A 0.8308
3 G A -0.4047
4 C A -0.8417
5 P A -1.2694
6 N A -1.4883
7 N A -1.2607
8 Y A -0.3389
9 Q A -1.3804
10 C A 0.0000
11 H A -1.4305
12 R A -2.5092
13 H A -1.3906
14 C A 0.0000
15 K A -2.6844
16 S A -1.5850
17 I A -1.2144
18 P A -1.0953
19 G A -1.4389
20 R A -1.7597
21 C A -1.1050
22 G A 0.0000
23 G A -0.2133
24 Y A 0.3549
25 C A -0.7761
26 G A -1.1573
27 G A -1.0846
28 W A -0.9122
29 H A -1.7809
30 R A -2.4264
31 L A -1.1326
32 R A -1.2369
33 C A -0.6441
34 T A 0.3222
35 C A -0.0048
36 Y A 0.3172
37 R A -1.5947
38 C A -0.7270
39 G A -0.6998
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Laboratory of Theory of Biopolymers 2018