Project name: query_structure

Status: done

Started: 2026-03-17 00:13:02
Settings
Chain sequence(s) A: MLPAPKNLVVSEVTEDSARLSWDDPWAFYESFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAIFTTGG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:07)
Show buried residues

Minimal score value
-3.0878
Maximal score value
1.8671
Average score
-0.6917
Total score value
-67.0904

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.1079
2 L A 0.6578
3 P A 0.4627
4 A A -0.1670
5 P A 0.0000
6 K A -1.7449
7 N A -1.5004
8 L A -0.2353
9 V A 1.0709
10 V A 0.5630
11 S A -0.7313
12 E A -1.9256
13 V A -1.1904
14 T A -1.9671
15 E A -3.0529
16 D A -3.0068
17 S A -2.2391
18 A A 0.0000
19 R A -1.5329
20 L A 0.0000
21 S A -0.6709
22 W A 0.0000
23 D A -1.8022
24 D A 0.0000
25 P A 0.0262
26 W A 1.2548
27 A A 0.5881
28 F A 0.8806
29 Y A 0.0000
30 E A -1.5464
31 S A -1.2122
32 F A 0.0000
33 L A 0.3252
34 I A 0.0000
35 Q A 0.4010
36 Y A 0.3467
37 Q A -0.9036
38 E A -1.8612
39 S A -1.4756
40 E A -2.7027
41 K A -2.4188
42 V A -0.2084
43 G A -1.2776
44 E A -1.6553
45 A A -0.3942
46 I A 0.8029
47 V A 1.5455
48 L A 1.2064
49 T A 0.3868
50 V A 0.0000
51 P A -1.0148
52 G A -1.0478
53 S A -1.1861
54 E A -1.7432
55 R A -1.3997
56 S A -0.9776
57 Y A -0.9228
58 D A -1.8162
59 L A 0.0000
60 T A -1.5296
61 G A -1.5447
62 L A 0.0000
63 K A -3.0878
64 P A -2.7031
65 G A -2.0238
66 T A -2.2300
67 E A -1.7793
68 Y A 0.0000
69 T A 0.0638
70 V A 0.0000
71 S A 0.4168
72 I A 0.0000
73 Y A 0.0000
74 G A 0.0000
75 V A 0.0000
76 H A -1.2137
77 N A -2.1438
78 V A -0.9156
79 Y A -0.2546
80 K A -2.2320
81 D A -2.7751
82 T A -2.0438
83 N A -2.5195
84 M A -1.2118
85 R A -1.3208
86 G A 0.0000
87 L A 0.8135
88 P A 0.0490
89 L A -0.0451
90 S A 0.3943
91 A A 1.1970
92 I A 1.8671
93 F A 0.0000
94 T A -0.8011
95 T A 0.0000
96 G A -1.8587
97 G A -1.7535
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Laboratory of Theory of Biopolymers 2018