| Chain sequence(s) |
A: MIAGVDQALAATGQASQRAAGASGGVTVGVGVGTEQRNLSVVAPSQFTFSSRSPDFVDETAGQSWCAILGLNQFHFAVTNDGVI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.9956 | |
| 2 | I | A | 2.5618 | |
| 3 | A | A | 0.8760 | |
| 4 | G | A | 0.4957 | |
| 5 | V | A | 1.3359 | |
| 6 | D | A | -0.6214 | |
| 7 | Q | A | -1.1692 | |
| 8 | A | A | -0.5056 | |
| 9 | L | A | 0.6516 | |
| 10 | A | A | -0.3732 | |
| 11 | A | A | -0.5509 | |
| 12 | T | A | -0.6726 | |
| 13 | G | A | -1.0706 | |
| 14 | Q | A | -1.7390 | |
| 15 | A | A | -0.9997 | |
| 16 | S | A | -1.3617 | |
| 17 | Q | A | -2.0594 | |
| 18 | R | A | -1.6150 | |
| 19 | A | A | -0.8027 | |
| 20 | A | A | -0.5643 | |
| 21 | G | A | -0.6305 | |
| 22 | A | A | -0.5655 | |
| 23 | S | A | -0.5782 | |
| 24 | G | A | -0.7182 | |
| 25 | G | A | -0.2166 | |
| 26 | V | A | 0.0000 | |
| 27 | T | A | -0.3510 | |
| 28 | V | A | -0.6098 | |
| 29 | G | A | -1.5943 | |
| 30 | V | A | 0.0000 | |
| 31 | G | A | -1.3521 | |
| 32 | V | A | -1.3661 | |
| 33 | G | A | -1.0229 | |
| 34 | T | A | -1.3325 | |
| 35 | E | A | -2.9959 | |
| 36 | Q | A | -3.1427 | |
| 37 | R | A | -3.1238 | |
| 38 | N | A | -2.3470 | |
| 39 | L | A | -0.5418 | |
| 40 | S | A | 0.0358 | |
| 41 | V | A | 0.8072 | |
| 42 | V | A | 1.6175 | |
| 43 | A | A | 0.4275 | |
| 44 | P | A | -0.1294 | |
| 45 | S | A | -0.5547 | |
| 46 | Q | A | -0.6788 | |
| 47 | F | A | 0.1600 | |
| 48 | T | A | 0.2112 | |
| 49 | F | A | 0.2443 | |
| 50 | S | A | -0.5075 | |
| 51 | S | A | -1.2961 | |
| 52 | R | A | -2.2573 | |
| 53 | S | A | -1.3505 | |
| 54 | P | A | -0.8622 | |
| 55 | D | A | -0.8564 | |
| 56 | F | A | 1.0018 | |
| 57 | V | A | 0.5890 | |
| 58 | D | A | -1.6294 | |
| 59 | E | A | -2.0766 | |
| 60 | T | A | -1.3430 | |
| 61 | A | A | -1.2381 | |
| 62 | G | A | -1.0976 | |
| 63 | Q | A | -0.4410 | |
| 64 | S | A | 0.0583 | |
| 65 | W | A | 0.9595 | |
| 66 | C | A | 0.5282 | |
| 67 | A | A | 0.4915 | |
| 68 | I | A | 0.4758 | |
| 69 | L | A | 0.2898 | |
| 70 | G | A | -0.0550 | |
| 71 | L | A | 0.8920 | |
| 72 | N | A | -0.4626 | |
| 73 | Q | A | -0.6366 | |
| 74 | F | A | 0.4691 | |
| 75 | H | A | -0.2289 | |
| 76 | F | A | 0.7025 | |
| 77 | A | A | 0.5730 | |
| 78 | V | A | 0.1389 | |
| 79 | T | A | -0.5422 | |
| 80 | N | A | -1.8175 | |
| 81 | D | A | -1.7746 | |
| 82 | G | A | -0.2460 | |
| 83 | V | A | 1.7576 | |
| 84 | I | A | 2.4788 |