| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPVHETEDVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPEGHPLPDAPPPSPLYTPPPASSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9435 | |
| 2 | L | A | 1.9637 | |
| 3 | P | A | 0.8354 | |
| 4 | P | A | 0.3769 | |
| 5 | T | A | 0.1250 | |
| 6 | T | A | 0.1345 | |
| 7 | P | A | 0.1746 | |
| 8 | V | A | 1.2079 | |
| 9 | A | A | 0.0790 | |
| 10 | K | A | -1.0359 | |
| 11 | V | A | -0.1930 | |
| 12 | Q | A | -1.4178 | |
| 13 | S | A | -1.5475 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3813 | |
| 16 | E | A | -2.4198 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4664 | |
| 20 | P | A | 0.1345 | |
| 21 | T | A | 0.1649 | |
| 22 | S | A | -0.0910 | |
| 23 | L | A | 0.1117 | |
| 24 | F | A | -0.0284 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2874 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9009 | |
| 31 | R | A | -2.6821 | |
| 32 | L | A | -0.7997 | |
| 33 | L | A | 1.1575 | |
| 34 | T | A | 1.3624 | |
| 35 | V | A | 1.8153 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2444 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6086 | |
| 40 | K | A | -1.6400 | |
| 41 | D | A | -0.9491 | |
| 42 | I | A | 0.8193 | |
| 43 | V | A | 1.0221 | |
| 44 | K | A | -1.1791 | |
| 45 | N | A | -1.9262 | |
| 46 | G | A | -1.2253 | |
| 47 | K | A | -0.9762 | |
| 48 | V | A | 1.4449 | |
| 49 | V | A | 2.0192 | |
| 50 | V | A | 1.2223 | |
| 51 | P | A | 0.4182 | |
| 52 | K | A | -0.6593 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1525 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4023 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2366 | |
| 70 | K | A | -1.7859 | |
| 71 | F | A | -0.6336 | |
| 72 | A | A | -0.5878 | |
| 73 | L | A | -0.8806 | |
| 74 | P | A | -1.2151 | |
| 75 | Q | A | -2.5126 | |
| 76 | K | A | -3.1155 | |
| 77 | D | A | -2.9974 | |
| 78 | F | A | -1.6761 | |
| 79 | Y | A | -1.9071 | |
| 80 | D | A | -2.7126 | |
| 81 | P | A | -2.3152 | |
| 82 | E | A | -3.0613 | |
| 83 | K | A | -3.4061 | |
| 84 | E | A | -2.4769 | |
| 85 | R | A | -1.3052 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6952 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9612 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3641 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6958 | |
| 99 | G | A | -0.5338 | |
| 100 | P | A | -0.3997 | |
| 101 | L | A | 0.0527 | |
| 102 | G | A | -0.1988 | |
| 103 | K | A | -0.6347 | |
| 104 | G | A | -0.4953 | |
| 105 | S | A | -0.5315 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1287 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4325 | |
| 110 | L | A | 0.4180 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9640 | |
| 113 | K | A | -0.3203 | |
| 114 | L | A | -1.0527 | |
| 115 | G | A | -1.1279 | |
| 116 | D | A | -1.3880 | |
| 117 | T | A | -1.0159 | |
| 118 | E | A | -1.7721 | |
| 119 | N | A | -2.1868 | |
| 120 | P | A | -1.9090 | |
| 121 | T | A | -1.5773 | |
| 122 | E | A | -2.3085 | |
| 123 | P | A | -1.1369 | |
| 124 | V | A | -1.0441 | |
| 125 | H | A | -1.6314 | |
| 126 | E | A | -2.6601 | |
| 127 | T | A | -2.5077 | |
| 128 | E | A | -3.1254 | |
| 129 | D | A | -2.9339 | |
| 130 | V | A | -1.7848 | |
| 131 | R | A | -0.9555 | |
| 132 | V | A | 0.4214 | |
| 133 | A | A | 0.4526 | |
| 134 | F | A | 0.2847 | |
| 135 | S | A | -0.0910 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5820 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2593 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5571 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1902 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1737 | |
| 157 | D | A | 0.3416 | |
| 158 | L | A | 0.8064 | |
| 159 | A | A | 0.1849 | |
| 160 | E | A | -1.4496 | |
| 161 | P | A | -0.1987 | |
| 162 | C | A | 0.1954 | |
| 163 | P | A | -0.1597 | |
| 164 | G | A | -0.0562 | |
| 165 | L | A | 0.6344 | |
| 166 | P | A | -0.0969 | |
| 167 | P | A | -0.3313 | |
| 168 | G | A | -0.4444 | |
| 169 | A | A | -0.0165 | |
| 170 | C | A | 0.6653 | |
| 171 | P | A | 0.5400 | |
| 172 | P | A | 0.7750 | |
| 173 | I | A | 2.0483 | |
| 174 | Q | A | 0.8928 | |
| 175 | L | A | 1.5294 | |
| 176 | V | A | 0.8703 | |
| 177 | N | A | -0.2897 | |
| 178 | S | A | 0.0328 | |
| 179 | V | A | 0.4305 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3783 | |
| 182 | D | A | 0.0804 | |
| 183 | G | A | -0.1599 | |
| 184 | D | A | -0.5265 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0990 | |
| 190 | F | A | 0.0606 | |
| 191 | G | A | -0.1028 | |
| 192 | N | A | -0.2406 | |
| 193 | M | A | -0.0854 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3889 | |
| 197 | E | A | -2.6040 | |
| 198 | L | A | -1.2217 | |
| 199 | Q | A | -2.5570 | |
| 200 | Q | A | -3.3244 | |
| 201 | D | A | -3.6011 | |
| 202 | R | A | -3.3316 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2197 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3304 | |
| 211 | S | A | -1.8643 | |
| 212 | T | A | -1.3995 | |
| 213 | R | A | -2.0272 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1539 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3762 | |
| 220 | L | A | 0.6043 | |
| 221 | K | A | -1.1152 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8175 | |
| 224 | N | A | -1.4998 | |
| 225 | E | A | -1.2434 | |
| 226 | A | A | -0.6144 | |
| 227 | Y | A | -0.3685 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6715 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0880 | |
| 234 | F | A | 0.2742 | |
| 235 | G | A | -0.8170 | |
| 236 | R | A | -2.6170 | |
| 237 | R | A | -2.9221 | |
| 238 | E | A | -2.1941 | |
| 239 | Q | A | -0.2429 | |
| 240 | V | A | 1.3657 | |
| 241 | Y | A | 1.1428 | |
| 242 | A | A | 0.1810 | |
| 243 | R | A | -1.1038 | |
| 244 | H | A | -0.9734 | |
| 245 | F | A | 0.0827 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8092 | |
| 249 | A | A | -1.4177 | |
| 250 | G | A | -1.4668 | |
| 251 | P | A | -1.1994 | |
| 252 | E | A | -1.3860 | |
| 253 | G | A | -1.2901 | |
| 254 | H | A | -1.4685 | |
| 255 | P | A | -1.3563 | |
| 256 | L | A | -0.3703 | |
| 257 | P | A | -0.8483 | |
| 258 | D | A | -1.7269 | |
| 259 | A | A | -0.8864 | |
| 260 | P | A | -0.9427 | |
| 261 | P | A | -0.6347 | |
| 262 | P | A | -0.3251 | |
| 263 | S | A | -0.2000 | |
| 264 | P | A | 0.3913 | |
| 265 | L | A | 1.3080 | |
| 266 | Y | A | 0.6139 | |
| 267 | T | A | 0.0526 | |
| 268 | P | A | -0.2983 | |
| 269 | P | A | 0.1196 | |
| 270 | P | A | -0.2082 | |
| 271 | A | A | 0.2041 | |
| 272 | S | A | 0.0402 | |
| 273 | S | A | 0.3973 | |
| 274 | P | A | 0.2824 | |
| 275 | Y | A | 1.3414 | |
| 276 | A | A | 1.0634 | |
| 277 | V | A | 1.4087 | |
| 278 | R | A | 0.2608 | |
| 279 | P | A | -0.5115 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5329 | |
| 282 | D | A | -0.9245 | |
| 283 | Y | A | 0.8415 | |
| 284 | F | A | 0.7064 | |
| 285 | G | A | 0.2462 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8785 | |
| 291 | L | A | 1.6030 | |
| 292 | V | A | 0.6287 | |
| 293 | S | A | -0.1620 | |
| 294 | S | A | -0.9637 | |
| 295 | D | A | -1.8434 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1143 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6477 | |
| 301 | R | A | -1.8327 | |
| 302 | P | A | -0.9511 | |
| 303 | F | A | -0.1935 | |
| 304 | W | A | -0.5688 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0932 | |
| 307 | R | A | -2.8313 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2497 | |
| 310 | G | A | -1.2177 | |
| 311 | N | A | -1.2709 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8331 | |
| 319 | N | A | -0.9428 | |
| 320 | E | A | -1.0401 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3347 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1054 | |
| 333 | N | A | 0.4968 | |
| 334 | F | A | 1.6722 | |
| 335 | T | A | 0.8299 | |
| 336 | I | A | 0.4289 | |
| 337 | S | A | -0.9530 | |
| 338 | Q | A | -1.7189 | |
| 339 | Q | A | -1.1727 | |
| 340 | L | A | 0.6968 | |
| 341 | C | A | 0.5812 | |
| 342 | T | A | 0.4044 | |
| 343 | P | A | 0.1805 | |
| 344 | L | A | 1.0865 | |
| 345 | P | A | 0.5697 | |
| 346 | N | A | -0.0156 | |
| 347 | V | A | 1.7128 | |
| 348 | Y | A | 1.6073 | |
| 349 | D | A | 0.2466 | |
| 350 | P | A | -0.3907 | |
| 351 | S | A | -0.3433 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7463 | |
| 354 | K | A | -1.8247 | |
| 355 | N | A | -1.7741 | |
| 356 | Y | A | -0.0907 | |
| 357 | L | A | 0.6239 | |
| 358 | R | A | 0.9306 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3623 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0776 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0534 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6939 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2773 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3126 | |
| 376 | L | A | -1.7100 | |
| 377 | D | A | -1.9777 | |
| 378 | P | A | -1.0304 | |
| 379 | G | A | -1.0110 | |
| 380 | V | A | -0.9301 | |
| 381 | L | A | -0.5236 | |
| 382 | A | A | -0.6519 | |
| 383 | H | A | -0.8123 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4170 | |
| 386 | T | A | -0.5566 | |
| 387 | M | A | -0.3055 | |
| 388 | N | A | -0.8673 | |
| 389 | P | A | -1.2512 | |
| 390 | T | A | -1.4498 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4468 | |
| 393 | E | A | -2.7797 | |
| 394 | N | A | -2.4093 | |
| 395 | W | A | -1.3734 | |
| 396 | N | A | -1.0955 | |
| 397 | L | A | -0.1825 | |
| 398 | G | A | 0.5298 | |
| 399 | F | A | 2.4210 | |
| 400 | V | A | 1.8250 | |
| 401 | P | A | 0.0438 | |
| 402 | P | A | -1.8632 | |
| 403 | K | A | -3.3238 | |
| 404 | E | A | -3.7724 | |
| 405 | R | A | -3.9106 | |
| 406 | E | A | -3.7785 | |
| 407 | D | A | -2.8427 | |
| 408 | P | A | -1.7500 | |
| 409 | Y | A | -0.9805 | |
| 410 | K | A | -2.1187 | |
| 411 | G | A | -0.6290 | |
| 412 | L | A | 0.6765 | |
| 413 | I | A | 1.5836 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3990 | |
| 416 | E | A | -1.7024 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9503 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0472 | |
| 421 | E | A | -2.7751 | |
| 422 | R | A | -2.6182 | |
| 423 | F | A | -1.2682 | |
| 424 | S | A | -1.4467 | |
| 425 | Q | A | -1.8050 | |
| 426 | D | A | -2.9525 | |
| 427 | L | A | -2.1639 | |
| 428 | D | A | -3.0285 | |
| 429 | Q | A | -2.7566 | |
| 430 | F | A | -1.6322 | |
| 431 | A | A | -1.1647 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3499 | |
| 435 | K | A | -1.1275 | |
| 436 | F | A | -0.1305 | |
| 437 | L | A | 0.7602 | |
| 438 | Y | A | 0.6060 | |
| 439 | Q | A | -0.3972 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine