| Chain sequence(s) |
A: VGGPMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQDA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 10 | V | A | 1.4906 | |
| 11 | G | A | 0.1542 | |
| 12 | G | A | -0.2534 | |
| 13 | P | A | -0.7641 | |
| 14 | M | A | -0.7269 | |
| 15 | D | A | -2.5262 | |
| 16 | A | A | -2.0356 | |
| 17 | S | A | -2.0604 | |
| 18 | V | A | -1.8647 | |
| 19 | E | A | -3.0721 | |
| 20 | E | A | -3.0393 | |
| 21 | E | A | -3.8058 | |
| 22 | G | A | -2.9389 | |
| 23 | V | A | 0.0000 | |
| 24 | R | A | -3.9811 | |
| 25 | R | A | -3.3794 | |
| 26 | A | A | -1.2881 | |
| 27 | L | A | -1.3596 | |
| 28 | D | A | -1.9598 | |
| 29 | F | A | 0.2626 | |
| 30 | A | A | 0.0131 | |
| 31 | V | A | -0.6799 | |
| 32 | G | A | -0.9123 | |
| 33 | E | A | -1.2237 | |
| 34 | Y | A | -0.4122 | |
| 35 | N | A | -1.4436 | |
| 36 | K | A | -2.4555 | |
| 37 | A | A | -1.3974 | |
| 38 | S | A | -1.5813 | |
| 39 | N | A | -1.9293 | |
| 40 | D | A | -1.9699 | |
| 41 | M | A | 0.1921 | |
| 42 | Y | A | 0.4608 | |
| 43 | H | A | -1.0811 | |
| 44 | S | A | -1.0124 | |
| 45 | R | A | -1.9151 | |
| 46 | A | A | -0.5697 | |
| 47 | L | A | 0.7685 | |
| 48 | Q | A | -0.1926 | |
| 49 | V | A | 0.6107 | |
| 50 | V | A | 0.9563 | |
| 51 | R | A | -1.5496 | |
| 52 | A | A | -1.8495 | |
| 53 | R | A | -2.8506 | |
| 54 | K | A | -1.7812 | |
| 55 | Q | A | -0.5434 | |
| 56 | I | A | 2.0342 | |
| 57 | V | A | 1.8842 | |
| 58 | A | A | 1.2229 | |
| 59 | G | A | 0.5596 | |
| 60 | V | A | 0.9770 | |
| 61 | N | A | 0.9186 | |
| 62 | Y | A | 1.8231 | |
| 63 | F | A | 2.0968 | |
| 64 | L | A | 1.0284 | |
| 65 | D | A | -0.6528 | |
| 66 | V | A | -0.2438 | |
| 67 | E | A | -1.6484 | |
| 68 | L | A | -0.9338 | |
| 69 | G | A | -1.9308 | |
| 70 | R | A | -2.2349 | |
| 71 | T | A | -1.1337 | |
| 72 | T | A | -0.5257 | |
| 73 | C | A | -0.9310 | |
| 74 | T | A | -1.1610 | |
| 75 | K | A | -2.0236 | |
| 76 | T | A | -1.2071 | |
| 77 | Q | A | -1.4681 | |
| 78 | P | A | -1.7103 | |
| 79 | N | A | -2.3958 | |
| 80 | L | A | -1.9565 | |
| 81 | D | A | -2.6507 | |
| 82 | N | A | -2.1607 | |
| 83 | C | A | 0.0000 | |
| 84 | P | A | -0.3697 | |
| 85 | F | A | -0.0260 | |
| 86 | H | A | -2.0004 | |
| 87 | D | A | -3.1054 | |
| 88 | Q | A | -2.8515 | |
| 89 | P | A | -2.2837 | |
| 90 | H | A | -2.3164 | |
| 91 | L | A | -2.2104 | |
| 92 | K | A | -3.9660 | |
| 93 | R | A | -4.2245 | |
| 94 | K | A | -3.2833 | |
| 95 | A | A | -2.0010 | |
| 96 | F | A | -0.7579 | |
| 97 | C | A | 0.0000 | |
| 98 | S | A | -0.2884 | |
| 99 | F | A | 0.7077 | |
| 100 | Q | A | 0.7929 | |
| 101 | I | A | 1.6098 | |
| 102 | Y | A | 1.2632 | |
| 103 | A | A | 0.0000 | |
| 104 | V | A | 0.0000 | |
| 105 | P | A | 0.0805 | |
| 106 | W | A | 0.3046 | |
| 107 | Q | A | -0.8347 | |
| 108 | G | A | -0.5602 | |
| 109 | T | A | 0.0567 | |
| 110 | M | A | 1.2739 | |
| 111 | T | A | 1.1345 | |
| 112 | L | A | 1.3687 | |
| 113 | S | A | 0.2049 | |
| 114 | K | A | -1.0299 | |
| 115 | S | A | -0.3670 | |
| 116 | T | A | -0.4354 | |
| 117 | C | A | -0.4789 | |
| 118 | Q | A | -1.8241 | |
| 119 | D | A | -2.7922 | |
| 120 | A | A | -1.6476 |