Project name: query_structure

Status: done

Started: 2026-03-16 23:07:37
Settings
Chain sequence(s) A: EGECGGFWWKCGSGKPACCPKYVCSPKWGLCNFPMP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-2.5956
Maximal score value
2.634
Average score
-0.124
Total score value
-4.4656

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -2.4557
2 G A -2.0267
3 E A -2.3396
4 C A -0.4028
5 G A 0.0000
6 G A 1.2195
7 F A 2.6340
8 W A 2.2446
9 W A 0.3525
10 K A -1.4223
11 C A -1.1044
12 G A -1.4280
13 S A -1.3392
14 G A -1.7295
15 K A -2.5956
16 P A -1.4303
17 A A -0.2331
18 C A 0.5388
19 C A 0.2513
20 P A -0.4578
21 K A -0.9455
22 Y A 1.2760
23 V A 2.0035
24 C A 1.0712
25 S A 0.1685
26 P A -0.5775
27 K A -1.2554
28 W A 0.0496
29 G A -0.4664
30 L A 0.0000
31 C A 0.0000
32 N A 1.8528
33 F A 1.6085
34 P A 0.9255
35 M A 1.2084
36 P A 0.3395
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Laboratory of Theory of Biopolymers 2018