| Chain sequence(s) |
A: EGECGGFWWKCGSGKPACCPKYVCSPKWGLCNFPMP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.4557 | |
| 2 | G | A | -2.0267 | |
| 3 | E | A | -2.3396 | |
| 4 | C | A | -0.4028 | |
| 5 | G | A | 0.0000 | |
| 6 | G | A | 1.2195 | |
| 7 | F | A | 2.6340 | |
| 8 | W | A | 2.2446 | |
| 9 | W | A | 0.3525 | |
| 10 | K | A | -1.4223 | |
| 11 | C | A | -1.1044 | |
| 12 | G | A | -1.4280 | |
| 13 | S | A | -1.3392 | |
| 14 | G | A | -1.7295 | |
| 15 | K | A | -2.5956 | |
| 16 | P | A | -1.4303 | |
| 17 | A | A | -0.2331 | |
| 18 | C | A | 0.5388 | |
| 19 | C | A | 0.2513 | |
| 20 | P | A | -0.4578 | |
| 21 | K | A | -0.9455 | |
| 22 | Y | A | 1.2760 | |
| 23 | V | A | 2.0035 | |
| 24 | C | A | 1.0712 | |
| 25 | S | A | 0.1685 | |
| 26 | P | A | -0.5775 | |
| 27 | K | A | -1.2554 | |
| 28 | W | A | 0.0496 | |
| 29 | G | A | -0.4664 | |
| 30 | L | A | 0.0000 | |
| 31 | C | A | 0.0000 | |
| 32 | N | A | 1.8528 | |
| 33 | F | A | 1.6085 | |
| 34 | P | A | 0.9255 | |
| 35 | M | A | 1.2084 | |
| 36 | P | A | 0.3395 |