| Chain sequence(s) |
A: MSHHHHHHSGMKLSPAELTLLLLERLRGTAEEFQALADTLNSQLGPVPLGELPPGQEYTLHQWGDHEAFVQWLLDVYGSREVYREMTRALDSYNYINYLLENLKEDVEAWLKGEPSKAEFPPEDAIQLIWYQLKHKFGKIPESFKELKKMIESGEYLESEEKAKEFLEIIEKLKEELKEIVREYLEKVSKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:26)
[INFO] Main: Simulation completed successfully. (00:06:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5513 | |
| 2 | S | A | -0.6179 | |
| 3 | H | A | -1.7465 | |
| 4 | H | A | -2.3307 | |
| 5 | H | A | -2.7733 | |
| 6 | H | A | -2.7297 | |
| 7 | H | A | -2.5775 | |
| 8 | H | A | -2.0794 | |
| 9 | S | A | -1.4763 | |
| 10 | G | A | -1.2457 | |
| 11 | M | A | -0.7647 | |
| 12 | K | A | -1.8384 | |
| 13 | L | A | -1.0517 | |
| 14 | S | A | -1.1369 | |
| 15 | P | A | -1.0051 | |
| 16 | A | A | 0.0000 | |
| 17 | E | A | -1.8251 | |
| 18 | L | A | 0.0000 | |
| 19 | T | A | 0.0000 | |
| 20 | L | A | -1.2877 | |
| 21 | L | A | -0.6340 | |
| 22 | L | A | 0.0000 | |
| 23 | L | A | 0.0000 | |
| 24 | E | A | -2.1330 | |
| 25 | R | A | -1.6381 | |
| 26 | L | A | 0.0000 | |
| 27 | R | A | -1.8140 | |
| 28 | G | A | 0.0000 | |
| 29 | T | A | -2.3984 | |
| 30 | A | A | -2.4627 | |
| 31 | E | A | -2.9118 | |
| 32 | E | A | -2.3255 | |
| 33 | F | A | 0.0000 | |
| 34 | Q | A | -2.3705 | |
| 35 | A | A | -1.8497 | |
| 36 | L | A | 0.0000 | |
| 37 | A | A | 0.0000 | |
| 38 | D | A | -2.3581 | |
| 39 | T | A | -1.3088 | |
| 40 | L | A | 0.0000 | |
| 41 | N | A | -1.4690 | |
| 42 | S | A | -1.4050 | |
| 43 | Q | A | -1.4282 | |
| 44 | L | A | -0.9172 | |
| 45 | G | A | -0.7364 | |
| 46 | P | A | -0.7584 | |
| 47 | V | A | 0.0000 | |
| 48 | P | A | -0.8831 | |
| 49 | L | A | -0.9586 | |
| 50 | G | A | -1.7851 | |
| 51 | E | A | -2.1165 | |
| 52 | L | A | -1.7935 | |
| 53 | P | A | -1.4522 | |
| 54 | P | A | -1.6717 | |
| 55 | G | A | -1.6977 | |
| 56 | Q | A | -2.3326 | |
| 57 | E | A | -3.0010 | |
| 58 | Y | A | 0.0000 | |
| 59 | T | A | -1.4602 | |
| 60 | L | A | 0.0000 | |
| 61 | H | A | -1.8628 | |
| 62 | Q | A | -2.2011 | |
| 63 | W | A | 0.0000 | |
| 64 | G | A | -2.1220 | |
| 65 | D | A | -3.3326 | |
| 66 | H | A | -3.1355 | |
| 67 | E | A | -3.0054 | |
| 68 | A | A | -1.9464 | |
| 69 | F | A | 0.0000 | |
| 70 | V | A | -1.5417 | |
| 71 | Q | A | -1.9828 | |
| 72 | W | A | 0.0000 | |
| 73 | L | A | 0.0000 | |
| 74 | L | A | -1.7275 | |
| 75 | D | A | -2.2060 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | 0.0000 | |
| 78 | G | A | -1.6258 | |
| 79 | S | A | -2.1678 | |
| 80 | R | A | -3.3739 | |
| 81 | E | A | -3.3435 | |
| 82 | V | A | 0.0000 | |
| 83 | Y | A | -2.4859 | |
| 84 | R | A | -3.1322 | |
| 85 | E | A | -2.7648 | |
| 86 | M | A | 0.0000 | |
| 87 | T | A | -1.7863 | |
| 88 | R | A | -2.8407 | |
| 89 | A | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | D | A | -1.7652 | |
| 92 | S | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | N | A | -0.4469 | |
| 95 | Y | A | 0.3182 | |
| 96 | I | A | 0.0000 | |
| 97 | N | A | 0.0000 | |
| 98 | Y | A | 0.3645 | |
| 99 | L | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | E | A | -1.2312 | |
| 102 | N | A | -1.6277 | |
| 103 | L | A | 0.0000 | |
| 104 | K | A | -2.0933 | |
| 105 | E | A | -2.3932 | |
| 106 | D | A | -2.0162 | |
| 107 | V | A | 0.0000 | |
| 108 | E | A | -2.3814 | |
| 109 | A | A | 0.0000 | |
| 110 | W | A | -1.3717 | |
| 111 | L | A | -1.9584 | |
| 112 | K | A | -2.6483 | |
| 113 | G | A | -2.0471 | |
| 114 | E | A | -2.8705 | |
| 115 | P | A | -2.0326 | |
| 116 | S | A | -2.4314 | |
| 117 | K | A | -2.8671 | |
| 118 | A | A | -2.2570 | |
| 119 | E | A | -2.2943 | |
| 120 | F | A | -1.4757 | |
| 121 | P | A | -1.3548 | |
| 122 | P | A | 0.0000 | |
| 123 | E | A | -3.0403 | |
| 124 | D | A | -2.2517 | |
| 125 | A | A | 0.0000 | |
| 126 | I | A | 0.0000 | |
| 127 | Q | A | -1.4671 | |
| 128 | L | A | -0.1493 | |
| 129 | I | A | 0.0000 | |
| 130 | W | A | -0.2020 | |
| 131 | Y | A | 0.4477 | |
| 132 | Q | A | -0.4114 | |
| 133 | L | A | 0.0000 | |
| 134 | K | A | -1.4932 | |
| 135 | H | A | -1.5436 | |
| 136 | K | A | -1.6230 | |
| 137 | F | A | -1.1499 | |
| 138 | G | A | -1.4764 | |
| 139 | K | A | -1.6699 | |
| 140 | I | A | -0.9283 | |
| 141 | P | A | 0.0000 | |
| 142 | E | A | -2.7621 | |
| 143 | S | A | -2.6853 | |
| 144 | F | A | 0.0000 | |
| 145 | K | A | -2.5712 | |
| 146 | E | A | -2.6458 | |
| 147 | L | A | 0.0000 | |
| 148 | K | A | -3.0586 | |
| 149 | K | A | -3.3460 | |
| 150 | M | A | -2.6862 | |
| 151 | I | A | 0.0000 | |
| 152 | E | A | -3.1677 | |
| 153 | S | A | -2.1339 | |
| 154 | G | A | -1.9095 | |
| 155 | E | A | -2.3180 | |
| 156 | Y | A | 0.0000 | |
| 157 | L | A | -1.6440 | |
| 158 | E | A | -2.8228 | |
| 159 | S | A | -3.0375 | |
| 160 | E | A | -3.9355 | |
| 161 | E | A | -4.2504 | |
| 162 | K | A | -4.0656 | |
| 163 | A | A | 0.0000 | |
| 164 | K | A | -4.3447 | |
| 165 | E | A | -4.1338 | |
| 166 | F | A | 0.0000 | |
| 167 | L | A | -3.2003 | |
| 168 | E | A | -3.9128 | |
| 169 | I | A | -3.1276 | |
| 170 | I | A | 0.0000 | |
| 171 | E | A | -3.9995 | |
| 172 | K | A | -4.1202 | |
| 173 | L | A | 0.0000 | |
| 174 | K | A | -3.4411 | |
| 175 | E | A | -4.2048 | |
| 176 | E | A | -3.8744 | |
| 177 | L | A | 0.0000 | |
| 178 | K | A | -3.6893 | |
| 179 | E | A | -4.0182 | |
| 180 | I | A | 0.0000 | |
| 181 | V | A | 0.0000 | |
| 182 | R | A | -3.7974 | |
| 183 | E | A | -3.7810 | |
| 184 | Y | A | -2.6462 | |
| 185 | L | A | 0.0000 | |
| 186 | E | A | -3.8378 | |
| 187 | K | A | -3.4754 | |
| 188 | V | A | 0.0000 | |
| 189 | S | A | -2.4758 | |
| 190 | K | A | -3.2235 | |
| 191 | N | A | -2.7320 | |
| 192 | S | A | -1.7895 |