Project name: query_structure

Status: done

Started: 2026-03-16 23:50:55
Settings
Chain sequence(s) A: LLACLFGNGRCSSNRDCCELTPVCKRGSCVSSGPGLVGGILGGIL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:27)
Show buried residues

Minimal score value
-2.7492
Maximal score value
2.7038
Average score
0.0231
Total score value
1.0394

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 2.3818
2 L A 2.4965
3 A A 1.6179
4 C A 1.8465
5 L A 2.2484
6 F A 1.7616
7 G A 0.1090
8 N A -1.3210
9 G A -1.4152
10 R A -2.6221
11 C A -2.0970
12 S A -1.7597
13 S A -2.1558
14 N A -2.4784
15 R A -2.3721
16 D A -1.4259
17 C A 0.0000
18 C A 0.2454
19 E A -0.6799
20 L A 0.8295
21 T A -0.0618
22 P A -0.8369
23 V A -1.0950
24 C A -2.0996
25 K A -2.5618
26 R A -2.7492
27 G A -2.3628
28 S A -2.3001
29 C A 0.0000
30 V A 0.0357
31 S A 0.0374
32 S A -0.4151
33 G A -0.4796
34 P A -0.0891
35 G A 0.5334
36 L A 2.1578
37 V A 2.2584
38 G A 1.5128
39 G A 1.9532
40 I A 2.7038
41 L A 2.2704
42 G A 1.2888
43 G A 1.4233
44 I A 2.4489
45 L A 2.2570
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Laboratory of Theory of Biopolymers 2018