| Chain sequence(s) |
A: YKLTNDALGVGISGKVVTCYRVTDGKKCALKVLGNHEKARREVDLHWRANNCPHIVNIYDIYENNNLVTKKNHLLVVMECMEGGELFNRIQKRADKAFTEREAAQIVYEISSAIKFLHDMDIAHRDLKPENLLYTEDGSNGKLKLTDFGFAKEVHTTKILQTPCYTPYYVAPEVLGPEKYDKSCDLWSLGVITYILLCGYPPFFSQNGQPISPGMKKRIRNGEYTFPKSEWANVSTNAKDLITNMLVTDPEKRLTINQVMDHPWIH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:34)
[INFO] Main: Simulation completed successfully. (00:06:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 0.3300 | |
| 2 | K | A | -0.4083 | |
| 3 | L | A | 0.4996 | |
| 4 | T | A | -0.7361 | |
| 5 | N | A | -1.6669 | |
| 6 | D | A | -1.8677 | |
| 7 | A | A | -0.4956 | |
| 8 | L | A | 0.5398 | |
| 9 | G | A | 0.6720 | |
| 10 | V | A | 1.7348 | |
| 11 | G | A | 0.9830 | |
| 12 | I | A | 1.9988 | |
| 13 | S | A | 0.7901 | |
| 14 | G | A | 0.3248 | |
| 15 | K | A | -0.0543 | |
| 16 | V | A | 0.2105 | |
| 17 | V | A | 0.0000 | |
| 18 | T | A | 0.0000 | |
| 19 | C | A | 0.0000 | |
| 20 | Y | A | -0.4584 | |
| 21 | R | A | -0.6609 | |
| 22 | V | A | 0.5707 | |
| 23 | T | A | -0.3893 | |
| 24 | D | A | -1.9913 | |
| 25 | G | A | -1.6180 | |
| 26 | K | A | -1.7375 | |
| 27 | K | A | -1.5802 | |
| 28 | C | A | 0.0000 | |
| 29 | A | A | 0.0000 | |
| 30 | L | A | 0.0000 | |
| 31 | K | A | 0.0000 | |
| 32 | V | A | 0.1574 | |
| 33 | L | A | 0.0000 | |
| 34 | G | A | -1.7810 | |
| 35 | N | A | -2.6187 | |
| 36 | H | A | -2.4045 | |
| 37 | E | A | -3.0473 | |
| 38 | K | A | -2.5182 | |
| 39 | A | A | 0.0000 | |
| 40 | R | A | -2.9769 | |
| 41 | R | A | -2.5293 | |
| 42 | E | A | 0.0000 | |
| 43 | V | A | 0.0000 | |
| 44 | D | A | -2.3022 | |
| 45 | L | A | 0.0000 | |
| 46 | H | A | 0.0000 | |
| 47 | W | A | -0.5348 | |
| 48 | R | A | -1.2104 | |
| 49 | A | A | 0.0000 | |
| 50 | N | A | -0.9196 | |
| 51 | N | A | -1.4778 | |
| 52 | C | A | 0.0000 | |
| 53 | P | A | -0.7920 | |
| 54 | H | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | V | A | 0.0000 | |
| 57 | N | A | -0.5793 | |
| 58 | I | A | 0.0000 | |
| 59 | Y | A | 0.1666 | |
| 60 | D | A | 0.2010 | |
| 61 | I | A | 0.5966 | |
| 62 | Y | A | -0.3143 | |
| 63 | E | A | -2.5256 | |
| 64 | N | A | -3.1052 | |
| 65 | N | A | -3.1317 | |
| 66 | N | A | -1.9005 | |
| 67 | L | A | 0.5276 | |
| 68 | V | A | 1.3019 | |
| 69 | T | A | -0.6153 | |
| 70 | K | A | -2.1418 | |
| 71 | K | A | -3.1739 | |
| 72 | N | A | -3.5180 | |
| 73 | H | A | -2.6456 | |
| 74 | L | A | 0.0000 | |
| 75 | L | A | -0.1302 | |
| 76 | V | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | M | A | 0.0000 | |
| 79 | E | A | -0.6844 | |
| 80 | C | A | -0.8106 | |
| 81 | M | A | -1.4743 | |
| 82 | E | A | -2.7465 | |
| 83 | G | A | -2.9719 | |
| 84 | G | A | -1.5416 | |
| 85 | E | A | -1.0508 | |
| 86 | L | A | 0.0000 | |
| 87 | F | A | -0.6206 | |
| 88 | N | A | -1.5184 | |
| 89 | R | A | -1.6260 | |
| 90 | I | A | -1.5880 | |
| 91 | Q | A | -2.5474 | |
| 92 | K | A | -2.9863 | |
| 93 | R | A | -2.8353 | |
| 94 | A | A | -2.5255 | |
| 95 | D | A | -3.1311 | |
| 96 | K | A | -3.1049 | |
| 97 | A | A | -1.7708 | |
| 98 | F | A | 0.0000 | |
| 99 | T | A | -1.2486 | |
| 100 | E | A | -1.7013 | |
| 101 | R | A | -2.7648 | |
| 102 | E | A | -2.0174 | |
| 103 | A | A | 0.0000 | |
| 104 | A | A | 0.0000 | |
| 105 | Q | A | -1.8667 | |
| 106 | I | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | Y | A | -0.0578 | |
| 109 | E | A | -0.4313 | |
| 110 | I | A | 0.0000 | |
| 111 | S | A | 0.0000 | |
| 112 | S | A | -0.1076 | |
| 113 | A | A | 0.0000 | |
| 114 | I | A | 0.0000 | |
| 115 | K | A | -1.0481 | |
| 116 | F | A | -0.6447 | |
| 117 | L | A | 0.0000 | |
| 118 | H | A | 0.0000 | |
| 119 | D | A | -2.1044 | |
| 120 | M | A | -1.3045 | |
| 121 | D | A | -2.0706 | |
| 122 | I | A | 0.0000 | |
| 123 | A | A | 0.0000 | |
| 124 | H | A | 0.0000 | |
| 125 | R | A | 0.0000 | |
| 126 | D | A | 0.0000 | |
| 127 | L | A | 0.0000 | |
| 128 | K | A | -0.3239 | |
| 129 | P | A | 0.0000 | |
| 130 | E | A | -1.0237 | |
| 131 | N | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | L | A | -0.8259 | |
| 134 | Y | A | 0.0000 | |
| 135 | T | A | -2.2271 | |
| 136 | E | A | -3.5719 | |
| 137 | D | A | -3.5739 | |
| 138 | G | A | -2.2133 | |
| 139 | S | A | -1.7639 | |
| 140 | N | A | -2.4076 | |
| 141 | G | A | -2.6382 | |
| 142 | K | A | -1.8824 | |
| 143 | L | A | 0.0000 | |
| 144 | K | A | -0.4900 | |
| 145 | L | A | 0.0000 | |
| 146 | T | A | -0.2872 | |
| 147 | D | A | -0.1249 | |
| 148 | F | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | F | A | 0.1950 | |
| 151 | A | A | 0.0000 | |
| 152 | K | A | -1.2573 | |
| 153 | E | A | -1.5467 | |
| 154 | V | A | -1.3791 | |
| 155 | H | A | -1.5981 | |
| 156 | T | A | -0.9551 | |
| 157 | T | A | -0.8914 | |
| 158 | K | A | -2.0510 | |
| 159 | I | A | -1.4809 | |
| 160 | L | A | 0.0000 | |
| 161 | Q | A | -2.4002 | |
| 162 | T | A | -1.0030 | |
| 163 | P | A | -0.8010 | |
| 164 | C | A | 0.0941 | |
| 165 | Y | A | 0.5590 | |
| 166 | T | A | 0.3401 | |
| 167 | P | A | 0.3703 | |
| 168 | Y | A | 0.8391 | |
| 169 | Y | A | 0.3811 | |
| 170 | V | A | 0.0000 | |
| 171 | A | A | 0.0000 | |
| 172 | P | A | 0.0000 | |
| 173 | E | A | 0.0000 | |
| 174 | V | A | 0.0000 | |
| 175 | L | A | 0.0000 | |
| 176 | G | A | -1.4718 | |
| 177 | P | A | -1.8503 | |
| 178 | E | A | -2.9962 | |
| 179 | K | A | -3.2117 | |
| 180 | Y | A | 0.0000 | |
| 181 | D | A | -1.9537 | |
| 182 | K | A | -0.9428 | |
| 183 | S | A | -0.9932 | |
| 184 | C | A | 0.0000 | |
| 185 | D | A | 0.0000 | |
| 186 | L | A | 0.0000 | |
| 187 | W | A | 0.0000 | |
| 188 | S | A | 0.0000 | |
| 189 | L | A | 0.0000 | |
| 190 | G | A | 0.0000 | |
| 191 | V | A | 0.0000 | |
| 192 | I | A | 0.0000 | |
| 193 | T | A | 0.0000 | |
| 194 | Y | A | 0.0000 | |
| 195 | I | A | 0.0000 | |
| 196 | L | A | 0.0000 | |
| 197 | L | A | 0.0000 | |
| 198 | C | A | 0.0000 | |
| 199 | G | A | -1.2449 | |
| 200 | Y | A | 0.3882 | |
| 201 | P | A | 0.5739 | |
| 202 | P | A | 0.0000 | |
| 203 | F | A | 0.0000 | |
| 204 | F | A | 0.8337 | |
| 205 | S | A | -0.7441 | |
| 206 | Q | A | -1.8070 | |
| 207 | N | A | -2.2517 | |
| 208 | G | A | -1.7061 | |
| 209 | Q | A | -1.6562 | |
| 210 | P | A | -0.7072 | |
| 211 | I | A | -0.4155 | |
| 212 | S | A | 0.0000 | |
| 213 | P | A | -1.2584 | |
| 214 | G | A | -1.4759 | |
| 215 | M | A | 0.0000 | |
| 216 | K | A | -1.8346 | |
| 217 | K | A | -3.2347 | |
| 218 | R | A | -2.5985 | |
| 219 | I | A | 0.0000 | |
| 220 | R | A | -2.7985 | |
| 221 | N | A | -2.7544 | |
| 222 | G | A | -2.0222 | |
| 223 | E | A | -2.4859 | |
| 224 | Y | A | -0.5543 | |
| 225 | T | A | -0.2805 | |
| 226 | F | A | -0.1872 | |
| 227 | P | A | -0.9654 | |
| 228 | K | A | -2.1654 | |
| 229 | S | A | -1.5917 | |
| 230 | E | A | -1.7527 | |
| 231 | W | A | 0.0000 | |
| 232 | A | A | -1.4274 | |
| 233 | N | A | -1.6829 | |
| 234 | V | A | -1.0119 | |
| 235 | S | A | -0.8663 | |
| 236 | T | A | -1.0084 | |
| 237 | N | A | -1.3741 | |
| 238 | A | A | 0.0000 | |
| 239 | K | A | -1.1125 | |
| 240 | D | A | -1.7118 | |
| 241 | L | A | 0.0000 | |
| 242 | I | A | 0.0000 | |
| 243 | T | A | -0.6184 | |
| 244 | N | A | -0.8615 | |
| 245 | M | A | 0.0000 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | -0.7423 | |
| 248 | T | A | -1.3806 | |
| 249 | D | A | -1.8905 | |
| 250 | P | A | -1.8570 | |
| 251 | E | A | -2.8803 | |
| 252 | K | A | -2.7117 | |
| 253 | R | A | 0.0000 | |
| 254 | L | A | -0.9839 | |
| 255 | T | A | -1.3604 | |
| 256 | I | A | 0.0000 | |
| 257 | N | A | -2.0781 | |
| 258 | Q | A | -2.0758 | |
| 259 | V | A | 0.0000 | |
| 260 | M | A | -1.4997 | |
| 261 | D | A | -2.5900 | |
| 262 | H | A | -1.8512 | |
| 263 | P | A | -1.2862 | |
| 264 | W | A | 0.0000 | |
| 265 | I | A | 0.0000 | |
| 266 | H | A | -1.6670 |