| Chain sequence(s) |
A: CGNLSTCLLGTYTQDAHKLQTYPRTNTGSGTPGGGGSGGGGSGRKKRRQRRRPPQGGGGSGGGGSLAEAKVLANRELDKYGVSDYYKNLINNAKTVEGVKALIDEILAALP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:25)
[INFO] Main: Simulation completed successfully. (00:01:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.6151 | |
| 2 | G | A | -0.5130 | |
| 3 | N | A | -1.0611 | |
| 4 | L | A | 1.2667 | |
| 5 | S | A | 0.0439 | |
| 6 | T | A | 0.0144 | |
| 7 | C | A | 1.0041 | |
| 8 | L | A | 1.9663 | |
| 9 | L | A | 1.7435 | |
| 10 | G | A | -0.1881 | |
| 11 | T | A | 0.1100 | |
| 12 | Y | A | 1.2850 | |
| 13 | T | A | 0.0175 | |
| 14 | Q | A | -1.5244 | |
| 15 | D | A | -1.9890 | |
| 16 | A | A | -0.4358 | |
| 17 | H | A | -1.2834 | |
| 18 | K | A | -1.5970 | |
| 19 | L | A | 1.0238 | |
| 20 | Q | A | -0.7974 | |
| 21 | T | A | -0.0657 | |
| 22 | Y | A | 1.1335 | |
| 23 | P | A | -0.3498 | |
| 24 | R | A | -1.9032 | |
| 25 | T | A | -0.6499 | |
| 26 | N | A | -1.2991 | |
| 27 | T | A | -0.3885 | |
| 28 | G | A | -0.5174 | |
| 29 | S | A | -0.3786 | |
| 30 | G | A | -0.5195 | |
| 31 | T | A | -0.2176 | |
| 32 | P | A | -0.3520 | |
| 33 | G | A | -0.6005 | |
| 34 | G | A | -0.6505 | |
| 35 | G | A | -0.6584 | |
| 36 | G | A | -0.6059 | |
| 37 | S | A | -0.4000 | |
| 38 | G | A | -0.5997 | |
| 39 | G | A | -0.6708 | |
| 40 | G | A | -0.6622 | |
| 41 | G | A | -0.5882 | |
| 42 | S | A | -0.3821 | |
| 43 | G | A | -0.8438 | |
| 44 | R | A | -2.2474 | |
| 45 | K | A | -2.3630 | |
| 46 | K | A | -2.3558 | |
| 47 | R | A | -2.5392 | |
| 48 | R | A | -2.4599 | |
| 49 | Q | A | -1.9137 | |
| 50 | R | A | -2.4217 | |
| 51 | R | A | -2.5297 | |
| 52 | R | A | -2.2228 | |
| 53 | P | A | -0.5902 | |
| 54 | P | A | -0.5100 | |
| 55 | Q | A | -1.3022 | |
| 56 | G | A | -0.6181 | |
| 57 | G | A | -0.6069 | |
| 58 | G | A | -0.6551 | |
| 59 | G | A | -0.6108 | |
| 60 | S | A | -0.3852 | |
| 61 | G | A | -0.5905 | |
| 62 | G | A | -0.6372 | |
| 63 | G | A | -0.6378 | |
| 64 | G | A | -0.5780 | |
| 65 | S | A | -0.1602 | |
| 66 | L | A | 0.4179 | |
| 67 | A | A | 0.0388 | |
| 68 | E | A | -0.4843 | |
| 69 | A | A | 0.0000 | |
| 70 | K | A | -0.1387 | |
| 71 | V | A | 0.8204 | |
| 72 | L | A | 1.6529 | |
| 73 | A | A | 0.0000 | |
| 74 | N | A | -0.3701 | |
| 75 | R | A | -1.2367 | |
| 76 | E | A | -1.2051 | |
| 77 | L | A | 0.0000 | |
| 78 | D | A | -1.2547 | |
| 79 | K | A | -1.6537 | |
| 80 | Y | A | 0.7369 | |
| 81 | G | A | -0.3244 | |
| 82 | V | A | 0.0695 | |
| 83 | S | A | -0.5014 | |
| 84 | D | A | -1.6154 | |
| 85 | Y | A | 1.0756 | |
| 86 | Y | A | 0.6915 | |
| 87 | K | A | -0.5522 | |
| 88 | N | A | -1.3585 | |
| 89 | L | A | 0.2943 | |
| 90 | I | A | 0.0000 | |
| 91 | N | A | -1.6312 | |
| 92 | N | A | -1.4984 | |
| 93 | A | A | -0.5255 | |
| 94 | K | A | -1.7094 | |
| 95 | T | A | -0.2717 | |
| 96 | V | A | 0.2075 | |
| 97 | E | A | -1.7553 | |
| 98 | G | A | -0.4786 | |
| 99 | V | A | 0.0000 | |
| 100 | K | A | -1.0079 | |
| 101 | A | A | -0.2608 | |
| 102 | L | A | 0.3952 | |
| 103 | I | A | -0.0482 | |
| 104 | D | A | -2.0328 | |
| 105 | E | A | -2.1369 | |
| 106 | I | A | 0.0000 | |
| 107 | L | A | 0.2039 | |
| 108 | A | A | 0.1361 | |
| 109 | A | A | 0.1784 | |
| 110 | L | A | 0.5808 | |
| 111 | P | A | -0.1462 |