| Chain sequence(s) |
A: RVCPRRILLECKKDSDCLAECVCLEHGYYCG
B: RVCPRILLECKKDSDCLAECVCLEHGYYCG input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.2292 | |
| 2 | V | A | -1.3209 | |
| 3 | C | A | -0.6517 | |
| 4 | P | A | -0.5027 | |
| 5 | R | A | -0.8035 | |
| 6 | I | A | 1.0743 | |
| 7 | L | A | 1.5908 | |
| 8 | L | A | 0.4187 | |
| 9 | E | A | -1.7615 | |
| 10 | C | A | 0.0000 | |
| 11 | K | A | -3.8074 | |
| 12 | K | A | -4.0011 | |
| 13 | D | A | -3.1069 | |
| 14 | S | A | -2.4293 | |
| 15 | D | A | -2.8621 | |
| 16 | C | A | -1.2580 | |
| 17 | L | A | 0.0709 | |
| 18 | A | A | -0.7850 | |
| 19 | E | A | -1.6726 | |
| 20 | C | A | 0.0000 | |
| 21 | V | A | -0.5683 | |
| 22 | C | A | -1.9400 | |
| 23 | L | A | -1.3454 | |
| 24 | E | A | -2.3380 | |
| 25 | H | A | -1.9764 | |
| 26 | G | A | -1.8617 | |
| 27 | Y | A | -0.8277 | |
| 28 | C | A | -0.7727 | |
| 29 | G | A | 0.0813 | |
| 1 | R | B | -2.2162 | |
| 2 | V | B | -1.2630 | |
| 3 | C | B | -0.4483 | |
| 4 | P | B | -0.2523 | |
| 5 | R | B | -0.3726 | |
| 6 | I | B | 1.8410 | |
| 7 | L | B | 1.8971 | |
| 8 | L | B | 0.4998 | |
| 9 | E | B | -1.7824 | |
| 10 | C | B | 0.0000 | |
| 11 | K | B | -3.7089 | |
| 12 | K | B | -3.7847 | |
| 13 | D | B | -3.0259 | |
| 14 | S | B | -2.4216 | |
| 15 | D | B | -3.0839 | |
| 16 | C | B | -1.2012 | |
| 17 | L | B | 0.1397 | |
| 18 | A | B | -0.5714 | |
| 19 | E | B | -1.2057 | |
| 20 | C | B | 0.0000 | |
| 21 | V | B | -0.7165 | |
| 22 | C | B | -1.8970 | |
| 23 | L | B | -1.2308 | |
| 24 | E | B | -2.0865 | |
| 25 | H | B | -2.0254 | |
| 26 | G | B | -1.8982 | |
| 27 | Y | B | -0.8686 | |
| 28 | C | B | -0.7632 | |
| 29 | G | B | -0.1364 |