Project name: query_structure

Status: done

Started: 2026-03-17 00:59:52
Settings
Chain sequence(s) A: RVCPRRILLECKKDSDCLAECVCLEHGYYCG
B: RVCPRILLECKKDSDCLAECVCLEHGYYCG
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:27)
Show buried residues

Minimal score value
-4.0011
Maximal score value
1.8971
Average score
-1.1753
Total score value
-68.1692

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 R A -2.2292
2 V A -1.3209
3 C A -0.6517
4 P A -0.5027
5 R A -0.8035
6 I A 1.0743
7 L A 1.5908
8 L A 0.4187
9 E A -1.7615
10 C A 0.0000
11 K A -3.8074
12 K A -4.0011
13 D A -3.1069
14 S A -2.4293
15 D A -2.8621
16 C A -1.2580
17 L A 0.0709
18 A A -0.7850
19 E A -1.6726
20 C A 0.0000
21 V A -0.5683
22 C A -1.9400
23 L A -1.3454
24 E A -2.3380
25 H A -1.9764
26 G A -1.8617
27 Y A -0.8277
28 C A -0.7727
29 G A 0.0813
1 R B -2.2162
2 V B -1.2630
3 C B -0.4483
4 P B -0.2523
5 R B -0.3726
6 I B 1.8410
7 L B 1.8971
8 L B 0.4998
9 E B -1.7824
10 C B 0.0000
11 K B -3.7089
12 K B -3.7847
13 D B -3.0259
14 S B -2.4216
15 D B -3.0839
16 C B -1.2012
17 L B 0.1397
18 A B -0.5714
19 E B -1.2057
20 C B 0.0000
21 V B -0.7165
22 C B -1.8970
23 L B -1.2308
24 E B -2.0865
25 H B -2.0254
26 G B -1.8982
27 Y B -0.8686
28 C B -0.7632
29 G B -0.1364
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Laboratory of Theory of Biopolymers 2018