Project name: 678b207d1326225

Status: done

Started: 2026-03-12 14:46:34
Settings
Chain sequence(s) A: AETVESCLAKPHTEGSFTNVWKEGDSRYANYEGCLWMAGGVVVCTGDETQCYGHWVPIGMAIPENEGGGSEGGGSEGGGSEGGGTKPPEYGDTPIPGTTWINPLDGTYPPGTEQNPANPNPSLEESQPLNTFMVQGNRFANRQGALTVYTGSFTQGTDPVKPYYLYTPGSSRAMYDAYWNGKFRDCAFHSGFNEDPFVCEYQGQSSDLPQPPANA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:15)
Show buried residues

Minimal score value
-3.363
Maximal score value
2.4186
Average score
-0.882
Total score value
-189.6248

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -1.6793
2 E A -2.2599
3 T A -1.2602
4 V A -0.7015
5 E A -1.9617
6 S A -1.3631
7 C A 0.0000
8 L A -0.9354
9 A A -1.0439
10 K A -1.3767
11 P A -0.9513
12 H A -1.3448
13 T A -1.5278
14 E A -2.0453
15 G A -0.8317
16 S A -0.0713
17 F A 0.0000
18 T A -0.9653
19 N A -1.6085
20 V A 0.0000
21 W A -1.3599
22 K A -2.1771
23 E A 0.0000
24 G A -2.0469
25 D A -2.2560
26 S A 0.0000
27 R A -1.3451
28 Y A 0.0000
29 A A 0.0000
30 N A -0.7333
31 Y A -0.6628
32 E A -1.9521
33 G A -1.4087
34 C A 0.0000
35 L A 0.0000
36 W A 0.0000
37 M A -0.1382
38 A A -0.2993
39 G A -0.1717
40 G A 0.4804
41 V A 2.1964
42 V A 2.1532
43 V A 2.4186
44 C A 0.5020
45 T A -0.8826
46 G A -1.6025
47 D A -2.6850
48 E A -2.5405
49 T A -2.1618
50 Q A -1.2767
51 C A 0.0000
52 Y A 1.2409
53 G A 0.0000
54 H A -0.9329
55 W A 0.0000
56 V A -0.6201
57 P A 0.0000
58 I A 0.0000
59 G A 0.0000
60 M A -0.4245
61 A A -0.6425
62 I A 0.0000
63 P A -2.1305
64 E A -3.3630
65 N A -3.3390
66 E A -3.2999
67 G A -2.3831
68 G A -2.3660
69 G A -2.0837
70 S A -1.6826
71 E A -2.9424
72 G A -2.8064
73 G A -2.0992
74 G A -1.3993
75 S A -1.6077
76 E A -3.0632
77 G A -2.6059
78 G A -2.5412
79 G A -2.1362
80 S A -1.9096
81 E A -2.9007
82 G A -2.7554
83 G A -2.2162
84 G A -2.2203
85 T A -2.0052
86 K A -2.7235
87 P A -1.7877
88 P A -1.5767
89 E A -2.6819
90 Y A -1.7637
91 G A -1.8877
92 D A -2.0808
93 T A -0.9301
94 P A 0.4544
95 I A 1.5163
96 P A 0.3441
97 G A -0.2918
98 T A 0.1629
99 T A -0.1276
100 W A -0.2818
101 I A 0.0000
102 N A 0.0000
103 P A 0.0000
104 L A 0.0428
105 D A -1.1681
106 G A 0.0000
107 T A -0.6963
108 Y A -0.9420
109 P A 0.0000
110 P A -0.5358
111 G A -0.9792
112 T A -1.3755
113 E A -2.6073
114 Q A -2.8349
115 N A -2.8330
116 P A -1.9174
117 A A -1.4329
118 N A -2.4506
119 P A -2.4325
120 N A -2.3351
121 P A -2.0464
122 S A -1.3835
123 L A -1.3334
124 E A -2.0904
125 E A -2.1612
126 S A -1.5192
127 Q A 0.0000
128 P A -1.0254
129 L A 0.0464
130 N A 0.0000
131 T A 0.0000
132 F A 0.0000
133 M A -0.4140
134 V A 0.0000
135 Q A -0.2983
136 G A -0.6834
137 N A -0.6776
138 R A 0.0000
139 F A 0.0000
140 A A 0.0000
141 N A 0.0000
142 R A -0.5683
143 Q A -1.0727
144 G A -1.0392
145 A A -0.1423
146 L A 0.0000
147 T A 0.0000
148 V A 0.0000
149 Y A 0.2650
150 T A -0.2991
151 G A -0.3033
152 S A -0.3331
153 F A -0.2924
154 T A -1.0746
155 Q A -1.8084
156 G A -1.5564
157 T A -1.4749
158 D A -2.2374
159 P A -1.2487
160 V A -0.2532
161 K A -0.0426
162 P A 0.1099
163 Y A 0.6291
164 Y A 0.0000
165 L A 0.0773
166 Y A 0.0000
167 T A 0.0000
168 P A -0.6067
169 G A -0.5916
170 S A -0.7371
171 S A 0.0000
172 R A 0.0000
173 A A 0.0000
174 M A 0.0000
175 Y A 0.3151
176 D A 0.0000
177 A A 0.0000
178 Y A 0.2881
179 W A 0.9242
180 N A 0.0799
181 G A -0.8626
182 K A 0.0000
183 F A 0.0000
184 R A -3.1740
185 D A -2.9223
186 C A -1.4631
187 A A -0.6142
188 F A -0.1911
189 H A -0.7977
190 S A -0.5988
191 G A -0.2115
192 F A 0.8964
193 N A -0.7586
194 E A -0.7961
195 D A 0.0000
196 P A 0.0000
197 F A 0.0000
198 V A -0.2399
199 C A 0.0000
200 E A -2.1170
201 Y A 0.0000
202 Q A -2.3010
203 G A -1.6480
204 Q A -1.1922
205 S A -0.9760
206 S A -0.7975
207 D A 0.0000
208 L A 0.0000
209 P A -0.7569
210 Q A -1.3670
211 P A -1.1944
212 P A -0.9109
213 A A -0.9458
214 N A -1.2725
215 A A -0.5658
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018