| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIVDGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHCGPDDRVSFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGAPLPSGSPPSPLYVRPPPSSPYAVLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQICTPEENVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9417 | |
| 2 | L | A | 1.9631 | |
| 3 | P | A | 0.6515 | |
| 4 | P | A | 0.3662 | |
| 5 | T | A | 0.1183 | |
| 6 | T | A | 0.1363 | |
| 7 | P | A | 0.1706 | |
| 8 | V | A | 1.2381 | |
| 9 | A | A | 0.0800 | |
| 10 | K | A | -1.0296 | |
| 11 | V | A | -0.1702 | |
| 12 | Q | A | -1.4178 | |
| 13 | S | A | -1.5589 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4162 | |
| 16 | E | A | -2.4376 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4570 | |
| 20 | P | A | 0.1266 | |
| 21 | T | A | 0.1773 | |
| 22 | S | A | -0.0992 | |
| 23 | L | A | 0.1086 | |
| 24 | F | A | -0.0440 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2925 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9041 | |
| 31 | R | A | -2.6918 | |
| 32 | L | A | -0.8061 | |
| 33 | L | A | 1.1559 | |
| 34 | T | A | 1.3723 | |
| 35 | V | A | 1.8448 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1622 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5819 | |
| 40 | K | A | -1.5438 | |
| 41 | D | A | -0.4495 | |
| 42 | I | A | 1.4952 | |
| 43 | I | A | 2.4816 | |
| 44 | V | A | 1.6253 | |
| 45 | D | A | -0.9517 | |
| 46 | G | A | -0.5234 | |
| 47 | K | A | -0.1831 | |
| 48 | V | A | 2.0676 | |
| 49 | L | A | 2.5780 | |
| 50 | V | A | 1.5533 | |
| 51 | P | A | 0.4420 | |
| 52 | K | A | -0.6204 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1494 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4024 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2437 | |
| 70 | K | A | -1.7936 | |
| 71 | F | A | -0.6439 | |
| 72 | A | A | -0.5752 | |
| 73 | L | A | -0.8570 | |
| 74 | P | A | -1.2705 | |
| 75 | Q | A | -2.5055 | |
| 76 | K | A | -3.1067 | |
| 77 | D | A | -2.9912 | |
| 78 | F | A | -1.6540 | |
| 79 | Y | A | -1.8932 | |
| 80 | D | A | -2.6951 | |
| 81 | P | A | -2.3066 | |
| 82 | E | A | -3.0493 | |
| 83 | K | A | -3.4000 | |
| 84 | E | A | -2.4652 | |
| 85 | R | A | -1.2964 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6730 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9535 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3621 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7041 | |
| 99 | G | A | -0.5374 | |
| 100 | P | A | -0.4048 | |
| 101 | L | A | 0.0426 | |
| 102 | G | A | -0.2000 | |
| 103 | K | A | -0.5895 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4269 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1002 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3132 | |
| 110 | L | A | 0.2181 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1327 | |
| 113 | K | A | -0.4800 | |
| 114 | L | A | -0.7437 | |
| 115 | G | A | -1.1030 | |
| 116 | D | A | -1.6077 | |
| 117 | T | A | -0.9635 | |
| 118 | E | A | -1.9470 | |
| 119 | N | A | -2.2360 | |
| 120 | P | A | -1.9228 | |
| 121 | T | A | -1.5605 | |
| 122 | E | A | -2.1844 | |
| 123 | P | A | -0.7286 | |
| 124 | V | A | -0.2176 | |
| 125 | H | A | -0.2478 | |
| 126 | C | A | -0.5796 | |
| 127 | G | A | -1.0732 | |
| 128 | P | A | -1.3464 | |
| 129 | D | A | -2.2458 | |
| 130 | D | A | -1.7308 | |
| 131 | R | A | -1.1851 | |
| 132 | V | A | 0.0965 | |
| 133 | S | A | 0.1836 | |
| 134 | F | A | 0.1494 | |
| 135 | S | A | -0.1290 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6912 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.2550 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5592 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2072 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1257 | |
| 157 | D | A | 0.2838 | |
| 158 | I | A | 0.8309 | |
| 159 | A | A | 0.1115 | |
| 160 | E | A | -1.4788 | |
| 161 | P | A | -0.2279 | |
| 162 | C | A | 0.1838 | |
| 163 | P | A | -0.1727 | |
| 164 | G | A | -0.0804 | |
| 165 | L | A | 0.5870 | |
| 166 | P | A | -0.1129 | |
| 167 | P | A | -0.3381 | |
| 168 | G | A | -0.4254 | |
| 169 | A | A | 0.0932 | |
| 170 | C | A | 0.8817 | |
| 171 | P | A | 0.5567 | |
| 172 | P | A | 0.7967 | |
| 173 | I | A | 2.0618 | |
| 174 | Q | A | 0.8666 | |
| 175 | L | A | 1.4525 | |
| 176 | V | A | 0.8377 | |
| 177 | N | A | -0.2956 | |
| 178 | S | A | 0.0273 | |
| 179 | V | A | 0.4305 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3854 | |
| 182 | D | A | 0.0825 | |
| 183 | G | A | -0.1622 | |
| 184 | D | A | -0.5482 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0887 | |
| 190 | F | A | 0.0428 | |
| 191 | G | A | -0.1005 | |
| 192 | N | A | -0.2686 | |
| 193 | M | A | -0.1401 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4087 | |
| 197 | E | A | -2.6464 | |
| 198 | L | A | -1.2236 | |
| 199 | Q | A | -2.5534 | |
| 200 | Q | A | -3.3128 | |
| 201 | D | A | -3.5744 | |
| 202 | R | A | -3.3298 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2182 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3493 | |
| 211 | S | A | -1.8906 | |
| 212 | T | A | -1.4549 | |
| 213 | R | A | -2.1294 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1525 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3855 | |
| 220 | L | A | 0.6186 | |
| 221 | K | A | -1.0803 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.7998 | |
| 224 | N | A | -1.4756 | |
| 225 | E | A | -1.2131 | |
| 226 | A | A | -0.5940 | |
| 227 | Y | A | -0.3485 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6659 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0810 | |
| 234 | F | A | 0.2637 | |
| 235 | G | A | -0.8137 | |
| 236 | R | A | -2.4505 | |
| 237 | R | A | -2.5403 | |
| 238 | E | A | -1.5185 | |
| 239 | Q | A | 0.2026 | |
| 240 | V | A | 1.6175 | |
| 241 | Y | A | 1.2004 | |
| 242 | A | A | 0.1490 | |
| 243 | R | A | -1.1825 | |
| 244 | H | A | -0.9619 | |
| 245 | F | A | -0.0832 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5886 | |
| 249 | C | A | -0.8592 | |
| 250 | G | A | -0.9147 | |
| 251 | P | A | -0.7764 | |
| 252 | D | A | -1.0371 | |
| 253 | G | A | -0.8050 | |
| 254 | A | A | -0.4170 | |
| 255 | P | A | -0.4518 | |
| 256 | L | A | 0.4693 | |
| 257 | P | A | 0.0867 | |
| 258 | S | A | -0.5145 | |
| 259 | G | A | -0.4541 | |
| 260 | S | A | -0.6538 | |
| 261 | P | A | -0.4332 | |
| 262 | P | A | -0.2142 | |
| 263 | S | A | 0.2166 | |
| 264 | P | A | 0.6977 | |
| 265 | L | A | 1.6808 | |
| 266 | Y | A | 1.2737 | |
| 267 | V | A | 1.0528 | |
| 268 | R | A | -0.5970 | |
| 269 | P | A | -0.1132 | |
| 270 | P | A | -0.5506 | |
| 271 | P | A | -0.3556 | |
| 272 | S | A | -0.3143 | |
| 273 | S | A | 0.0564 | |
| 274 | P | A | 0.3405 | |
| 275 | Y | A | 1.3896 | |
| 276 | A | A | 0.9928 | |
| 277 | V | A | 2.0530 | |
| 278 | L | A | 1.5055 | |
| 279 | P | A | 0.5668 | |
| 280 | P | A | -0.1111 | |
| 281 | T | A | -0.3490 | |
| 282 | D | A | -0.9318 | |
| 283 | Y | A | 0.7468 | |
| 284 | F | A | 0.6668 | |
| 285 | G | A | 0.2009 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8609 | |
| 291 | L | A | 1.6353 | |
| 292 | V | A | 0.6087 | |
| 293 | S | A | -0.1589 | |
| 294 | S | A | -0.9618 | |
| 295 | D | A | -1.8421 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1001 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6294 | |
| 301 | R | A | -1.8057 | |
| 302 | P | A | -0.9270 | |
| 303 | F | A | -0.1808 | |
| 304 | W | A | -0.5646 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0892 | |
| 307 | R | A | -2.8357 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2564 | |
| 310 | G | A | -1.2182 | |
| 311 | N | A | -1.2714 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8147 | |
| 319 | N | A | -0.9313 | |
| 320 | E | A | -1.0360 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3323 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0584 | |
| 333 | N | A | 0.5995 | |
| 334 | F | A | 1.8091 | |
| 335 | T | A | 0.9616 | |
| 336 | I | A | 0.5120 | |
| 337 | S | A | -0.9491 | |
| 338 | Q | A | -1.6786 | |
| 339 | Q | A | -1.2271 | |
| 340 | I | A | 0.9631 | |
| 341 | C | A | 0.4210 | |
| 342 | T | A | -0.3161 | |
| 343 | P | A | -0.9593 | |
| 344 | E | A | -2.3844 | |
| 345 | E | A | -2.6721 | |
| 346 | N | A | -1.6561 | |
| 347 | V | A | 0.2073 | |
| 348 | Y | A | 0.8000 | |
| 349 | D | A | -0.2219 | |
| 350 | P | A | -0.5762 | |
| 351 | S | A | -0.2999 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8177 | |
| 354 | K | A | -1.9190 | |
| 355 | N | A | -1.7587 | |
| 356 | Y | A | 0.1034 | |
| 357 | L | A | 0.7883 | |
| 358 | R | A | 1.0709 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4037 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0859 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0693 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6932 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2763 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3172 | |
| 376 | L | A | -1.7135 | |
| 377 | D | A | -2.0053 | |
| 378 | P | A | -1.0448 | |
| 379 | G | A | -1.0180 | |
| 380 | V | A | -0.9370 | |
| 381 | L | A | -0.5338 | |
| 382 | A | A | -0.6573 | |
| 383 | H | A | -0.8113 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4100 | |
| 386 | T | A | -0.5525 | |
| 387 | M | A | -0.2995 | |
| 388 | N | A | -0.8659 | |
| 389 | P | A | -1.2457 | |
| 390 | T | A | -1.4355 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4280 | |
| 393 | E | A | -2.7555 | |
| 394 | N | A | -2.3610 | |
| 395 | W | A | -1.3520 | |
| 396 | N | A | -1.0780 | |
| 397 | L | A | -0.1541 | |
| 398 | G | A | 0.5492 | |
| 399 | F | A | 2.4208 | |
| 400 | V | A | 1.8352 | |
| 401 | P | A | 0.0526 | |
| 402 | P | A | -1.8419 | |
| 403 | K | A | -3.3101 | |
| 404 | E | A | -3.7645 | |
| 405 | R | A | -3.8824 | |
| 406 | E | A | -3.7783 | |
| 407 | D | A | -2.8723 | |
| 408 | P | A | -1.7642 | |
| 409 | Y | A | -0.9878 | |
| 410 | K | A | -2.1219 | |
| 411 | G | A | -0.6358 | |
| 412 | L | A | 0.6803 | |
| 413 | I | A | 1.5905 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3935 | |
| 416 | E | A | -1.6872 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9510 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0540 | |
| 421 | E | A | -2.7838 | |
| 422 | R | A | -2.5692 | |
| 423 | F | A | -1.2816 | |
| 424 | S | A | -1.4682 | |
| 425 | Q | A | -1.7520 | |
| 426 | D | A | -2.8981 | |
| 427 | L | A | -2.0012 | |
| 428 | D | A | -2.7761 | |
| 429 | Q | A | -2.6191 | |
| 430 | F | A | -1.4439 | |
| 431 | A | A | -0.9341 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.7100 | |
| 435 | K | A | -0.7761 | |
| 436 | F | A | 0.0996 | |
| 437 | L | A | 0.9859 | |
| 438 | Y | A | 0.7898 | |
| 439 | Q | A | -0.2980 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine