Project name: 67c0e3d63beb2e0

Status: done

Started: 2024-06-25 11:51:45
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Chain sequence(s) A: QTAPVPMPDLKNVKSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVEVKSEKLDFKDRVQSKIGSLDNITHVPGGGN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:53)
Show buried residues

Minimal score value
-2.9134
Maximal score value
2.2741
Average score
-0.444
Total score value
-55.5029

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
244 Q A -0.7648
245 T A 0.0000
246 A A -0.2245
247 P A 0.1430
248 V A 1.2291
249 P A 0.3243
250 M A 0.0780
251 P A -0.1451
252 D A -0.4401
253 L A 0.3215
254 K A -1.1077
255 N A -0.7762
256 V A 0.0521
257 K A -1.5748
258 S A 0.0000
259 K A -0.2289
260 I A 0.1703
261 G A -0.2963
262 S A -0.3761
263 T A 0.0000
264 E A -0.6170
265 N A 0.0000
266 L A -0.6160
267 K A -0.5979
268 H A -0.8222
269 Q A -1.6069
270 P A -1.7778
271 G A 0.0000
272 G A 0.0000
273 G A -2.3247
274 K A -2.5934
275 V A 1.6530
276 Q A 0.8165
277 I A 2.2741
278 I A 1.5108
279 N A -1.0438
280 K A -1.2920
281 K A -1.3598
282 L A 0.2700
283 D A -1.0810
284 L A -0.1174
285 S A 0.0000
286 N A 0.0000
287 V A 0.8016
288 Q A -0.7427
289 S A 0.0000
290 K A -1.0994
291 C A -0.2911
292 G A -1.0001
293 S A -1.3256
294 K A -2.4798
295 D A -2.7929
296 N A -2.4021
297 I A -1.6270
298 K A -1.7422
299 H A -0.8810
300 V A 0.5395
301 P A 0.0954
302 G A 0.0000
303 G A 0.0000
304 G A 0.0000
305 S A -1.0204
275 V A 2.1623
276 Q A 0.5355
277 I A 1.5997
278 I A 0.9853
279 N A -1.0287
280 K A -0.9972
281 K A -0.9915
282 L A 1.1834
283 D A 0.0000
284 L A 1.7622
285 S A 0.7962
286 N A -0.3808
287 V A 0.5200
288 Q A 0.0000
289 S A 0.0000
290 K A -0.6650
291 C A -0.1092
292 G A -0.8770
293 S A -1.0913
294 K A -1.6545
295 D A -1.4176
296 N A 0.0000
297 I A 0.7177
298 K A -0.0155
299 H A 0.0000
300 V A 1.1637
301 P A 0.0000
302 G A 0.0000
303 G A 0.0000
304 G A 0.0000
305 S A -0.5638
337 V A 0.0000
338 E A -0.7443
339 V A 0.3847
340 K A -1.2187
341 S A -1.3879
342 E A -1.8406
343 K A -1.8196
344 L A -0.7531
345 D A -1.3528
346 F A 0.2323
347 K A -1.9101
348 D A -2.9134
349 R A -2.6593
350 V A -0.7872
351 Q A -1.7645
352 S A -1.6848
353 K A -1.6045
354 I A -0.7361
355 G A -0.5175
356 S A -0.6005
357 L A -0.4683
358 D A -1.6554
359 N A -1.3352
360 I A -0.5915
361 T A 0.0000
362 H A 0.0000
363 V A 0.4094
364 P A 0.1831
365 G A 0.0000
366 G A 0.0000
367 G A 0.0000
368 N A -1.0915
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Laboratory of Theory of Biopolymers 2018