Project name: P002

Status: done

Started: 2026-05-16 18:16:05
Settings
Chain sequence(s) A: DIQMTQSPSSVSASVGDRVEITCRASQGINTWLAWYQQDPGKAPKLLIYAASSLKSGVPERFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPLTFGGGTKVEIKGGGGSGGGGSGGGGSQVYLVQSIAEFKKPGASVKVSCIFSGYTFTSYGFSWVRQAPGQGLEWGGWISASNGNTYYAQKLQGRVTMTTDTSTSTAYMELRHLRSDDTAVYYCARVYADYADYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:33)
Show buried residues

Minimal score value
-1.9993
Maximal score value
2.0152
Average score
-0.2578
Total score value
-61.6248

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.7405
2 I A -0.2859
3 Q A -1.1484
4 M A 0.0000
5 T A -0.2351
6 Q A 0.0000
7 S A -0.1491
8 P A -0.1797
9 S A -0.2706
10 S A -0.3904
11 V A 0.2662
12 S A -0.4959
13 A A 0.0000
14 S A 0.1640
15 V A 1.2552
16 G A -0.3706
17 D A -1.2138
18 R A -1.9993
19 V A 0.0000
20 E A -1.8216
21 I A 0.0000
22 T A -0.0257
23 C A 0.0000
24 R A -1.8026
25 A A 0.0000
26 S A -0.4213
27 Q A -1.3198
28 G A -0.7047
29 I A 0.0000
30 N A -1.2963
31 T A -0.1545
32 W A 0.5819
33 L A 0.0000
34 A A 0.0000
35 W A 0.0000
36 Y A 0.0000
37 Q A 0.0000
38 Q A 0.0000
39 D A -0.8340
40 P A -0.4919
41 G A -0.8347
42 K A -1.7858
43 A A -0.2993
44 P A 0.0000
45 K A -1.2898
46 L A 0.0000
47 L A 0.0000
48 I A 0.0000
49 Y A 0.3297
50 A A 0.0792
51 A A 0.0000
52 S A -0.2286
53 S A -0.0332
54 L A 0.4398
55 K A -0.4061
56 S A -0.3852
57 G A -0.4669
58 V A 0.0957
59 P A -0.4212
60 E A -1.8936
61 R A -0.6147
62 F A 0.0000
63 S A -0.1453
64 G A -0.1464
65 S A -0.2612
66 G A -0.2782
67 S A -0.2573
68 G A -0.4150
69 T A -0.2748
70 D A -1.1604
71 F A 0.0000
72 T A -0.0215
73 L A 0.0000
74 T A -0.2257
75 I A 0.0000
76 S A -0.3026
77 S A -0.1556
78 L A 0.0000
79 Q A -0.4337
80 P A -0.6615
81 E A -1.8669
82 D A 0.0000
83 F A 0.2709
84 A A 0.0000
85 T A 0.0000
86 Y A 0.0000
87 Y A 0.0000
88 C A 0.0000
89 Q A 0.0000
90 Q A 0.0000
91 A A -0.1056
92 N A -0.6225
93 S A -0.1072
94 F A 0.8980
95 P A 0.2425
96 L A 0.0000
97 T A 0.0225
98 F A 0.1838
99 G A 0.0000
100 G A -0.4663
101 G A 0.0000
102 T A 0.0000
103 K A -1.5681
104 V A 0.0000
105 E A -1.2384
106 I A 0.6550
107 K A -1.5930
108 G A -0.8506
109 G A -0.6297
110 G A -0.6426
111 G A -0.5955
112 S A -0.3814
113 G A -0.5893
114 G A -0.6376
115 G A -0.6389
116 G A -0.5903
117 S A -0.3811
118 G A -0.6026
119 G A -0.6540
120 G A -0.6444
121 G A -0.5923
122 S A -0.5197
123 Q A -1.1880
124 V A 0.1186
125 Y A 0.8502
126 L A 0.0000
127 V A 0.9195
128 Q A 0.0000
129 S A 0.3348
130 I A 2.0152
131 A A 0.4662
132 E A -0.1229
133 F A 1.7481
134 K A -0.4869
135 K A -1.8095
136 P A -0.4532
137 G A -0.6066
138 A A -0.0884
139 S A -0.2822
140 V A 0.0000
141 K A -1.6602
142 V A 0.0000
143 S A -0.0039
144 C A 0.0000
145 I A 0.7838
146 F A 0.0000
147 S A -0.1329
148 G A -0.3927
149 Y A 0.1604
150 T A -0.0235
151 F A 0.0000
152 T A -0.0964
153 S A -0.1710
154 Y A 0.2165
155 G A 0.0000
156 F A 0.0000
157 S A 0.0000
158 W A 0.0000
159 V A 0.0000
160 R A 0.0000
161 Q A -0.1483
162 A A 0.0000
163 P A -0.3432
164 G A -0.7442
165 Q A -1.3105
166 G A -0.3421
167 L A 0.0000
168 E A -0.5052
169 W A 0.0000
170 G A 0.0000
171 G A 0.0000
172 W A 0.1540
173 I A 0.0000
174 S A 0.0000
175 A A 0.0000
176 S A -0.4605
177 N A -1.3745
178 G A -0.7548
179 N A -1.0888
180 T A -0.1063
181 Y A 0.6822
182 Y A 0.3817
183 A A 0.0000
184 Q A -1.6495
185 K A -1.9251
186 L A 0.0000
187 Q A -1.4161
188 G A -0.7527
189 R A -0.5958
190 V A 0.0000
191 T A -0.1426
192 M A 0.0000
193 T A -0.0455
194 T A -0.1456
195 D A -0.6981
196 T A -0.2405
197 S A -0.2370
198 T A -0.1106
199 S A -0.0667
200 T A 0.0000
201 A A 0.0000
202 Y A 0.2312
203 M A 0.0000
204 E A -1.0321
205 L A 0.0000
206 R A -1.6729
207 H A -1.3249
208 L A 0.0000
209 R A -1.6676
210 S A -0.8511
211 D A -1.8287
212 D A 0.0000
213 T A -0.0166
214 A A 0.0000
215 V A 0.5662
216 Y A 0.0000
217 Y A 0.0000
218 C A 0.0000
219 A A 0.0000
220 R A 0.0000
221 V A 0.3896
222 Y A 1.2216
223 A A 0.2416
224 D A -0.1654
225 Y A 0.0918
226 A A 0.0000
227 D A -0.1292
228 Y A 0.4316
229 W A 0.2081
230 G A 0.0000
231 Q A -1.2108
232 G A -0.2878
233 T A 0.0000
234 L A 1.0158
235 V A 0.0000
236 T A 0.2012
237 V A 0.0000
238 S A -0.1322
239 S A -0.2293
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Laboratory of Theory of Biopolymers 2018