Project name: 20_x4e7_i20e6_x11e6_i14e7

Status: done

Started: 2025-08-11 19:18:16
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Chain sequence(s) A: GPGPGLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:43)
Show buried residues

Minimal score value
-4.3888
Maximal score value
3.5591
Average score
-0.3367
Total score value
-88.2264

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7283
2 P A -0.7696
3 G A -0.9199
4 P A -0.3070
5 G A 0.6572
6 L A 2.0594
7 L A 2.0858
8 C A 0.8007
9 H A -1.0566
10 E A -2.3375
11 Q A -1.8991
12 L A -0.1538
13 S A -1.0933
14 D A -2.3644
15 S A -2.4358
16 E A -3.6719
17 E A -4.3888
18 E A -4.2022
19 N A -3.6361
20 D A -3.3878
21 G A -1.8741
22 P A -1.3275
23 G A -1.3251
24 P A -1.0597
25 G A -1.3814
26 Q A -1.8119
27 S A -1.0469
28 T A -0.6709
29 H A -0.3802
30 V A 1.2071
31 D A 0.0189
32 I A 0.7493
33 R A -1.4143
34 T A -0.3083
35 L A 0.7928
36 E A -1.0851
37 D A -1.0782
38 L A 1.1909
39 L A 1.7849
40 M A 0.9797
41 G A -0.1210
42 P A -0.6004
43 G A -0.7922
44 P A -0.8064
45 G A -0.8370
46 T A -0.3305
47 P A -0.1620
48 T A 0.0290
49 L A 0.6285
50 H A -0.7139
51 E A -1.0548
52 Y A 0.5794
53 M A 0.8702
54 L A 0.7751
55 D A -0.6731
56 L A 0.1962
57 Q A -1.3357
58 P A -1.8705
59 E A -2.6215
60 T A -1.7439
61 G A -1.4792
62 P A -0.8678
63 G A -0.6927
64 P A -0.5549
65 G A -0.6846
66 L A -0.3178
67 Q A -2.0234
68 D A -2.3170
69 I A -1.0875
70 V A -0.3042
71 L A 0.2524
72 H A -0.4150
73 L A 0.3537
74 E A -1.8297
75 P A -1.8970
76 Q A -2.5034
77 N A -2.6019
78 E A -1.8564
79 I A 0.5944
80 P A -0.2367
81 G A -0.5640
82 P A -0.8666
83 G A -0.7045
84 P A -0.2174
85 G A 0.2605
86 V A 1.7992
87 Y A 1.7339
88 D A 0.5552
89 F A 2.0598
90 A A 0.8147
91 F A 1.1709
92 R A -1.1021
93 D A -1.0467
94 L A 0.9198
95 A A 0.5274
96 A A 0.4303
97 Y A 0.2825
98 R A -1.4123
99 F A -0.4433
100 H A -0.6097
101 N A -0.4647
102 I A 1.1877
103 A A 0.3166
104 G A -0.4060
105 H A -0.3075
106 Y A 0.9243
107 A A 0.6063
108 A A 0.8299
109 Y A 1.8468
110 C A 1.9129
111 Y A 2.2396
112 S A 1.3830
113 L A 1.9552
114 Y A 1.4369
115 G A 0.3575
116 T A 0.8222
117 T A 0.6291
118 L A 1.6125
119 A A 0.6757
120 A A 0.8998
121 Y A 1.0999
122 K A -0.2386
123 T A 0.6196
124 V A 1.9202
125 L A 1.6308
126 E A -0.1584
127 L A 1.2531
128 T A 0.4812
129 E A -0.1106
130 V A 1.3821
131 A A 0.2614
132 A A -0.2941
133 Y A 0.2567
134 A A -0.8681
135 E A -2.4962
136 K A -2.5752
137 L A -1.7450
138 R A -3.6617
139 H A -3.7552
140 L A -2.7165
141 N A -3.6295
142 E A -4.2318
143 K A -3.9981
144 R A -4.1857
145 R A -3.6000
146 F A -1.3180
147 H A -2.1401
148 N A -2.3427
149 G A -1.4839
150 P A -1.2370
151 G A -0.9181
152 P A -0.7196
153 G A -0.6364
154 L A -0.3685
155 D A -2.5410
156 K A -3.7095
157 K A -3.5100
158 Q A -3.4001
159 R A -2.6098
160 F A -0.0267
161 H A -1.1302
162 N A -1.3606
163 I A -0.0901
164 R A -1.9576
165 G A -1.8660
166 R A -2.0225
167 W A -0.0449
168 T A -0.0644
169 G A -0.7193
170 P A -0.6733
171 G A -1.0555
172 P A -1.1219
173 G A -1.8995
174 N A -2.3611
175 P A -1.9912
176 A A -2.0697
177 E A -3.4771
178 K A -3.2156
179 L A -1.8039
180 R A -3.5799
181 H A -3.6355
182 L A -2.9137
183 N A -3.5299
184 E A -4.1654
185 K A -4.1081
186 R A -3.8800
187 R A -3.0440
188 F A -0.5771
189 G A -0.9730
190 P A -0.8162
191 G A -0.7509
192 P A -1.0721
193 G A -0.9922
194 S A -1.0387
195 K A -1.2563
196 I A 0.3362
197 S A -0.9322
198 E A -1.7215
199 Y A 0.0832
200 R A -1.1581
201 H A -0.7786
202 Y A 1.0382
203 C A 1.3788
204 Y A 1.9413
205 S A 1.5033
206 L A 2.6227
207 Y A 2.0119
208 G A 0.4570
209 G A -0.2404
210 P A -0.5482
211 G A -0.7174
212 P A -0.5813
213 G A -0.3975
214 Y A 0.4577
215 R A -0.3253
216 A A 0.2502
217 H A 0.6443
218 Y A 1.8719
219 N A 1.7572
220 I A 3.0235
221 V A 2.9626
222 T A 2.7012
223 F A 3.5591
224 A A 2.5431
225 A A 2.0969
226 Y A 2.2602
227 T A 2.0027
228 L A 2.4352
229 Q A 1.1276
230 D A 0.6180
231 I A 2.8169
232 V A 3.0513
233 L A 2.4741
234 H A 1.8435
235 L A 3.2630
236 A A 2.8196
237 A A 2.7568
238 Y A 3.3761
239 L A 3.2782
240 L A 3.4476
241 M A 3.2476
242 G A 2.2695
243 T A 2.5016
244 L A 2.9914
245 G A 2.0813
246 I A 3.3188
247 V A 3.2775
248 A A 2.2311
249 A A 2.1950
250 Y A 2.9926
251 L A 2.4120
252 P A 0.2205
253 A A -0.8900
254 R A -2.8020
255 R A -3.3175
256 A A -2.4988
257 E A -3.0550
258 P A -1.9252
259 Q A -1.5965
260 A A -0.4860
261 A A 0.3674
262 Y A 1.2030
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Laboratory of Theory of Biopolymers 2018