| Chain sequence(s) |
A: AASARAILAFLDCERRLRGTGPQVIQVIKPRN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.4148 | |
| 2 | A | A | -0.4898 | |
| 3 | S | A | -0.4833 | |
| 4 | A | A | 0.0721 | |
| 5 | R | A | -1.0876 | |
| 6 | A | A | -0.0247 | |
| 7 | I | A | 1.6387 | |
| 8 | L | A | 1.2471 | |
| 9 | A | A | 0.2544 | |
| 10 | F | A | 1.6113 | |
| 11 | L | A | 0.1761 | |
| 12 | D | A | -1.9758 | |
| 13 | C | A | -1.1239 | |
| 14 | E | A | -2.3300 | |
| 15 | R | A | -3.7181 | |
| 16 | R | A | -3.1565 | |
| 17 | L | A | -1.6047 | |
| 18 | R | A | -3.0291 | |
| 19 | G | A | -1.9360 | |
| 20 | T | A | -1.5535 | |
| 21 | G | A | -1.4254 | |
| 22 | P | A | -0.7616 | |
| 23 | Q | A | -1.0616 | |
| 24 | V | A | -0.2832 | |
| 25 | I | A | 2.0561 | |
| 26 | Q | A | 0.5808 | |
| 27 | V | A | 1.8192 | |
| 28 | I | A | 0.6861 | |
| 29 | K | A | -1.6479 | |
| 30 | P | A | -1.8303 | |
| 31 | R | A | -2.5599 | |
| 32 | N | A | -2.3206 |