Project name: Metagencin1

Status: done

Started: 2025-12-21 17:16:59
Settings
Chain sequence(s) A: AASARAILAFLDCERRLRGTGPQVIQVIKPRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:08)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:08)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:08)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:08)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:08)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:00)
Show buried residues

Minimal score value
-3.7181
Maximal score value
2.0561
Average score
-0.7711
Total score value
-24.6764

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.4148
2 A A -0.4898
3 S A -0.4833
4 A A 0.0721
5 R A -1.0876
6 A A -0.0247
7 I A 1.6387
8 L A 1.2471
9 A A 0.2544
10 F A 1.6113
11 L A 0.1761
12 D A -1.9758
13 C A -1.1239
14 E A -2.3300
15 R A -3.7181
16 R A -3.1565
17 L A -1.6047
18 R A -3.0291
19 G A -1.9360
20 T A -1.5535
21 G A -1.4254
22 P A -0.7616
23 Q A -1.0616
24 V A -0.2832
25 I A 2.0561
26 Q A 0.5808
27 V A 1.8192
28 I A 0.6861
29 K A -1.6479
30 P A -1.8303
31 R A -2.5599
32 N A -2.3206
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Laboratory of Theory of Biopolymers 2018