| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDGDGHEEIRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVRDEETGEFHWPPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.3258 | |
| 2 | S | A | -0.2810 | |
| 3 | D | A | -1.8479 | |
| 4 | V | A | -1.4689 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.3740 | |
| 7 | D | A | -3.2882 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1266 | |
| 10 | V | A | 0.0776 | |
| 11 | V | A | 1.5197 | |
| 12 | A | A | 0.8773 | |
| 13 | A | A | 0.2916 | |
| 14 | T | A | -0.5351 | |
| 15 | P | A | -1.1315 | |
| 16 | T | A | -1.0060 | |
| 17 | S | A | -0.5471 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7050 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1319 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.7613 | |
| 24 | G | A | -3.0363 | |
| 25 | D | A | -3.5193 | |
| 26 | G | A | -2.8499 | |
| 27 | H | A | -3.1520 | |
| 28 | E | A | -3.4928 | |
| 29 | E | A | -3.4737 | |
| 30 | I | A | 0.0000 | |
| 31 | R | A | -3.2310 | |
| 32 | Y | A | -1.7506 | |
| 33 | Y | A | 0.0000 | |
| 34 | R | A | -0.7582 | |
| 35 | I | A | 0.0000 | |
| 36 | T | A | -0.6771 | |
| 37 | Y | A | -0.3802 | |
| 38 | G | A | 0.0000 | |
| 39 | E | A | -1.5516 | |
| 40 | T | A | -1.2268 | |
| 41 | G | A | -1.2195 | |
| 42 | G | A | -1.3325 | |
| 43 | N | A | -1.5180 | |
| 44 | S | A | -0.8783 | |
| 45 | P | A | -0.4047 | |
| 46 | V | A | 0.2662 | |
| 47 | Q | A | -1.1854 | |
| 48 | E | A | -1.8141 | |
| 49 | F | A | -0.7570 | |
| 50 | T | A | -0.3548 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.2003 | |
| 53 | G | A | -2.3050 | |
| 54 | S | A | -1.7496 | |
| 55 | K | A | -1.9518 | |
| 56 | S | A | -1.6775 | |
| 57 | T | A | -0.7483 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2277 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6639 | |
| 62 | G | A | -1.0321 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3748 | |
| 65 | P | A | -1.6678 | |
| 66 | G | A | -1.4544 | |
| 67 | V | A | -1.4485 | |
| 68 | D | A | -2.0933 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.7685 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.1811 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | -0.1409 | |
| 75 | A | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | R | A | -3.0934 | |
| 78 | D | A | -3.7458 | |
| 79 | E | A | -3.8481 | |
| 80 | E | A | -3.5270 | |
| 81 | T | A | -2.3763 | |
| 82 | G | A | -2.5806 | |
| 83 | E | A | -2.4955 | |
| 84 | F | A | -0.8362 | |
| 85 | H | A | -1.1743 | |
| 86 | W | A | -0.6368 | |
| 87 | P | A | -0.4305 | |
| 88 | P | A | -0.2833 | |
| 89 | I | A | -0.1618 | |
| 90 | S | A | -0.3522 | |
| 91 | I | A | -0.7016 | |
| 92 | N | A | -1.7195 | |
| 93 | Y | A | -1.4656 | |
| 94 | R | A | -2.5435 | |
| 95 | T | A | -1.5236 |