Project name: CL03

Status: done

Started: 2025-12-29 08:08:20
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Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGFNFSSYSIHWVRQAPGKGLEWVASIYPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSHSYYSHTWWVSYGMDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSGQRPITFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:53)
Show buried residues

Minimal score value
-2.623
Maximal score value
2.0916
Average score
-0.4555
Total score value
-106.5874

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0557
2 V H -1.2688
3 Q H -1.2089
4 L H 0.0000
5 V H 0.4361
6 E H 0.0000
7 S H -0.2727
8 G H -0.6140
9 G H 0.1917
11 G H 0.7207
12 L H 1.4467
13 V H -0.0073
14 Q H -1.3396
15 P H -1.4510
16 G H -1.4528
17 G H -1.1509
18 S H -1.0901
19 L H -0.6579
20 R H -1.4711
21 L H 0.0000
22 S H -0.2975
23 C H 0.0000
24 A H -0.3445
25 A H 0.0000
26 S H -1.2825
27 G H -1.4684
28 F H -1.0598
29 N H -1.3550
30 F H 0.0000
35 S H -0.1565
36 S H 0.1554
37 Y H 0.1912
38 S H 0.2619
39 I H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6873
45 A H -1.0679
46 P H -0.8494
47 G H -1.4840
48 K H -2.3810
49 G H -1.6725
50 L H 0.0000
51 E H -1.0389
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 S H 0.0000
56 I H 0.0000
57 Y H 0.6471
58 P H 0.3764
59 Y H 1.1573
62 S H 0.2321
63 G H -0.1976
64 S H 0.0455
65 T H 0.3841
66 Y H 0.6864
67 Y H -0.4135
68 A H -1.2335
69 D H -2.2854
70 S H -1.6716
71 V H 0.0000
72 K H -2.1517
74 G H -1.5824
75 R H -1.4109
76 F H 0.0000
77 T H -0.5718
78 I H 0.0000
79 S H -0.2220
80 A H -0.3967
81 D H -1.1206
82 T H -1.1332
83 S H -1.3414
84 K H -2.2470
85 N H -1.9353
86 T H -0.9212
87 A H 0.0000
88 Y H -0.2801
89 L H 0.0000
90 Q H -0.9669
91 M H 0.0000
92 N H -1.2699
93 S H -1.2478
94 L H 0.0000
95 R H -2.2393
96 A H -1.6700
97 E H -2.1961
98 D H 0.0000
99 T H -0.3666
100 A H 0.0000
101 V H 0.5693
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 Q H 0.0640
108 S H 0.0000
109 H H 0.9769
110 S H 1.3291
111 Y H 2.0062
111A Y H 2.0916
111B S H 0.6613
111C H H -0.0142
112D T H 0.8273
112C W H 2.0194
112B W H 2.0838
112A V H 1.7494
112 S H 0.9990
113 Y H 0.4514
114 G H 0.0000
115 M H 0.0000
116 D H 0.0000
117 Y H -0.0281
118 W H -0.2549
119 G H 0.0000
120 Q H -1.4717
121 G H -0.4057
122 T H 0.4639
123 L H 1.6330
124 V H 0.0000
125 T H 0.3404
126 V H 0.0000
127 S H -0.7619
128 S H -0.5695
1 D L -2.5188
2 I L 0.0000
3 Q L -2.3131
4 M L 0.0000
5 T L -1.4108
6 Q L 0.0000
7 S L -0.8874
8 P L -0.6652
9 S L -0.9338
10 S L -1.1719
11 L L -0.7639
12 S L -0.9856
13 A L 0.0000
14 S L -0.1758
15 V L 0.8167
16 G L -0.4629
17 D L -1.5432
18 R L -2.1619
19 V L 0.0000
20 T L -0.5838
21 I L 0.0000
22 T L -0.7277
23 C L 0.0000
24 R L -2.6123
25 A L 0.0000
26 S L -1.8931
27 Q L -2.1515
28 S L -1.2698
29 V L 0.0000
36 S L -0.6357
37 S L -0.3905
38 A L 0.0000
39 V L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.8245
46 P L -1.3271
47 G L -1.6710
48 K L -2.6230
49 A L -1.6588
50 P L 0.0000
51 K L -1.5943
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.2780
56 S L 0.1032
57 A L 0.0000
65 S L -0.4035
66 S L 0.0958
67 L L 0.3864
68 Y L 0.0727
69 S L -0.2061
70 G L -0.4238
71 V L -0.2668
72 P L -0.2683
74 S L -0.3463
75 R L -0.7097
76 F L 0.0000
77 S L -0.3246
78 G L -0.4434
79 S L -0.9275
80 R L -1.6701
83 S L -1.2826
84 G L -1.3394
85 T L -1.5627
86 D L -1.7936
87 F L 0.0000
88 T L -0.7930
89 L L 0.0000
90 T L -0.6136
91 I L 0.0000
92 S L -1.3260
93 S L -1.0783
94 L L 0.0000
95 Q L -0.6944
96 P L -0.5825
97 E L -1.8655
98 D L 0.0000
99 F L -0.6124
100 A L 0.0000
101 T L -1.0710
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L -0.5524
108 G L -0.9331
109 Q L -1.5811
114 R L -1.2431
115 P L -1.3771
116 I L 0.0000
117 T L -1.0823
118 F L 0.0000
119 G L 0.0000
120 Q L -1.7990
121 G L 0.0000
122 T L 0.0000
123 K L -1.7694
124 V L 0.0000
125 E L -1.4479
126 I L 0.5341
127 K L -0.9605
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Laboratory of Theory of Biopolymers 2018