| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFNFSSYSIHWVRQAPGKGLEWVASIYPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQSHSYYSHTWWVSYGMDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSGQRPITFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:51)
[INFO] Main: Simulation completed successfully. (00:01:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0557 | |
| 2 | V | H | -1.2688 | |
| 3 | Q | H | -1.2089 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.4361 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2727 | |
| 8 | G | H | -0.6140 | |
| 9 | G | H | 0.1917 | |
| 11 | G | H | 0.7207 | |
| 12 | L | H | 1.4467 | |
| 13 | V | H | -0.0073 | |
| 14 | Q | H | -1.3396 | |
| 15 | P | H | -1.4510 | |
| 16 | G | H | -1.4528 | |
| 17 | G | H | -1.1509 | |
| 18 | S | H | -1.0901 | |
| 19 | L | H | -0.6579 | |
| 20 | R | H | -1.4711 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2975 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.3445 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.2825 | |
| 27 | G | H | -1.4684 | |
| 28 | F | H | -1.0598 | |
| 29 | N | H | -1.3550 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.1565 | |
| 36 | S | H | 0.1554 | |
| 37 | Y | H | 0.1912 | |
| 38 | S | H | 0.2619 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6873 | |
| 45 | A | H | -1.0679 | |
| 46 | P | H | -0.8494 | |
| 47 | G | H | -1.4840 | |
| 48 | K | H | -2.3810 | |
| 49 | G | H | -1.6725 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0389 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | 0.6471 | |
| 58 | P | H | 0.3764 | |
| 59 | Y | H | 1.1573 | |
| 62 | S | H | 0.2321 | |
| 63 | G | H | -0.1976 | |
| 64 | S | H | 0.0455 | |
| 65 | T | H | 0.3841 | |
| 66 | Y | H | 0.6864 | |
| 67 | Y | H | -0.4135 | |
| 68 | A | H | -1.2335 | |
| 69 | D | H | -2.2854 | |
| 70 | S | H | -1.6716 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.1517 | |
| 74 | G | H | -1.5824 | |
| 75 | R | H | -1.4109 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.5718 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2220 | |
| 80 | A | H | -0.3967 | |
| 81 | D | H | -1.1206 | |
| 82 | T | H | -1.1332 | |
| 83 | S | H | -1.3414 | |
| 84 | K | H | -2.2470 | |
| 85 | N | H | -1.9353 | |
| 86 | T | H | -0.9212 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2801 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9669 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2699 | |
| 93 | S | H | -1.2478 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2393 | |
| 96 | A | H | -1.6700 | |
| 97 | E | H | -2.1961 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3666 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.5693 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | Q | H | 0.0640 | |
| 108 | S | H | 0.0000 | |
| 109 | H | H | 0.9769 | |
| 110 | S | H | 1.3291 | |
| 111 | Y | H | 2.0062 | |
| 111A | Y | H | 2.0916 | |
| 111B | S | H | 0.6613 | |
| 111C | H | H | -0.0142 | |
| 112D | T | H | 0.8273 | |
| 112C | W | H | 2.0194 | |
| 112B | W | H | 2.0838 | |
| 112A | V | H | 1.7494 | |
| 112 | S | H | 0.9990 | |
| 113 | Y | H | 0.4514 | |
| 114 | G | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | -0.0281 | |
| 118 | W | H | -0.2549 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.4717 | |
| 121 | G | H | -0.4057 | |
| 122 | T | H | 0.4639 | |
| 123 | L | H | 1.6330 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3404 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7619 | |
| 128 | S | H | -0.5695 | |
| 1 | D | L | -2.5188 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3131 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4108 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8874 | |
| 8 | P | L | -0.6652 | |
| 9 | S | L | -0.9338 | |
| 10 | S | L | -1.1719 | |
| 11 | L | L | -0.7639 | |
| 12 | S | L | -0.9856 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.1758 | |
| 15 | V | L | 0.8167 | |
| 16 | G | L | -0.4629 | |
| 17 | D | L | -1.5432 | |
| 18 | R | L | -2.1619 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5838 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7277 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.6123 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.8931 | |
| 27 | Q | L | -2.1515 | |
| 28 | S | L | -1.2698 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -0.6357 | |
| 37 | S | L | -0.3905 | |
| 38 | A | L | 0.0000 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.8245 | |
| 46 | P | L | -1.3271 | |
| 47 | G | L | -1.6710 | |
| 48 | K | L | -2.6230 | |
| 49 | A | L | -1.6588 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.5943 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.2780 | |
| 56 | S | L | 0.1032 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.4035 | |
| 66 | S | L | 0.0958 | |
| 67 | L | L | 0.3864 | |
| 68 | Y | L | 0.0727 | |
| 69 | S | L | -0.2061 | |
| 70 | G | L | -0.4238 | |
| 71 | V | L | -0.2668 | |
| 72 | P | L | -0.2683 | |
| 74 | S | L | -0.3463 | |
| 75 | R | L | -0.7097 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3246 | |
| 78 | G | L | -0.4434 | |
| 79 | S | L | -0.9275 | |
| 80 | R | L | -1.6701 | |
| 83 | S | L | -1.2826 | |
| 84 | G | L | -1.3394 | |
| 85 | T | L | -1.5627 | |
| 86 | D | L | -1.7936 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7930 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6136 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3260 | |
| 93 | S | L | -1.0783 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.6944 | |
| 96 | P | L | -0.5825 | |
| 97 | E | L | -1.8655 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.6124 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.0710 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | -0.5524 | |
| 108 | G | L | -0.9331 | |
| 109 | Q | L | -1.5811 | |
| 114 | R | L | -1.2431 | |
| 115 | P | L | -1.3771 | |
| 116 | I | L | 0.0000 | |
| 117 | T | L | -1.0823 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.7990 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.7694 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.4479 | |
| 126 | I | L | 0.5341 | |
| 127 | K | L | -0.9605 |