| Chain sequence(s) |
A: SNLSTAVLGKLSQELHKLQTYPRTDVGAGTP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.3892 | |
| 2 | N | A | -0.6027 | |
| 3 | L | A | 1.1240 | |
| 4 | S | A | 0.5246 | |
| 5 | T | A | 0.3631 | |
| 6 | A | A | 0.3908 | |
| 7 | V | A | 0.6381 | |
| 8 | L | A | 0.7537 | |
| 9 | G | A | -0.6796 | |
| 10 | K | A | -1.7368 | |
| 11 | L | A | -0.5796 | |
| 12 | S | A | -0.9604 | |
| 13 | Q | A | -2.4914 | |
| 14 | E | A | -2.2095 | |
| 15 | L | A | -0.4020 | |
| 16 | H | A | -1.7657 | |
| 17 | K | A | -1.5944 | |
| 18 | L | A | 0.0707 | |
| 19 | Q | A | -1.1419 | |
| 20 | T | A | -0.8013 | |
| 21 | Y | A | 0.1505 | |
| 22 | P | A | -0.8814 | |
| 23 | R | A | -1.9112 | |
| 24 | T | A | -1.2171 | |
| 25 | D | A | -1.7572 | |
| 26 | V | A | 0.1355 | |
| 27 | G | A | -0.4707 | |
| 28 | A | A | -0.0986 | |
| 29 | G | A | -0.4091 | |
| 30 | T | A | -0.3268 | |
| 31 | P | A | -0.3968 |