| Chain sequence(s) |
A: LGVPTLAHAPAVVAAPIAVKAAVPIATSYQNSQLISTGAVAVAAPTVVKAAPIAVAAPVAAAPILSAPLVHSVAAAPVVHSVAAAPVYKAW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 19 | L | A | 1.6419 | |
| 20 | G | A | 1.0647 | |
| 21 | V | A | 1.9217 | |
| 22 | P | A | 1.1570 | |
| 23 | T | A | 0.8663 | |
| 24 | L | A | 1.4404 | |
| 25 | A | A | 0.2391 | |
| 26 | H | A | -0.5834 | |
| 27 | A | A | 0.0931 | |
| 28 | P | A | 0.2378 | |
| 29 | A | A | 1.1684 | |
| 30 | V | A | 2.6312 | |
| 31 | V | A | 2.6333 | |
| 32 | A | A | 1.7309 | |
| 33 | A | A | 1.1467 | |
| 34 | P | A | 1.2659 | |
| 35 | I | A | 2.2120 | |
| 36 | A | A | 1.3548 | |
| 37 | V | A | 1.5439 | |
| 38 | K | A | -0.2439 | |
| 39 | A | A | 0.2738 | |
| 40 | A | A | 1.0022 | |
| 41 | V | A | 2.0390 | |
| 42 | P | A | 1.6130 | |
| 43 | I | A | 2.3711 | |
| 44 | A | A | 1.2635 | |
| 45 | T | A | 0.5526 | |
| 46 | S | A | 0.1507 | |
| 47 | Y | A | 0.2290 | |
| 48 | Q | A | -1.0495 | |
| 49 | N | A | -1.4774 | |
| 50 | S | A | -0.8799 | |
| 51 | Q | A | -0.6214 | |
| 52 | L | A | 1.4683 | |
| 53 | I | A | 1.8641 | |
| 54 | S | A | 0.8864 | |
| 55 | T | A | 0.6845 | |
| 56 | G | A | 0.2207 | |
| 57 | A | A | 0.9099 | |
| 58 | V | A | 2.2003 | |
| 59 | A | A | 1.7650 | |
| 60 | V | A | 2.3165 | |
| 61 | A | A | 1.1077 | |
| 62 | A | A | 0.6521 | |
| 63 | P | A | 0.7243 | |
| 64 | T | A | 0.9639 | |
| 65 | V | A | 2.0720 | |
| 66 | V | A | 1.7781 | |
| 67 | K | A | -0.3449 | |
| 68 | A | A | 0.2158 | |
| 69 | A | A | 0.2565 | |
| 70 | P | A | 0.7904 | |
| 71 | I | A | 2.4299 | |
| 72 | A | A | 1.8578 | |
| 73 | V | A | 2.3304 | |
| 74 | A | A | 1.4350 | |
| 75 | A | A | 0.9464 | |
| 76 | P | A | 0.8757 | |
| 77 | V | A | 1.7295 | |
| 78 | A | A | 0.8868 | |
| 79 | A | A | 0.7483 | |
| 80 | A | A | 0.7624 | |
| 81 | P | A | 1.0875 | |
| 82 | I | A | 2.6229 | |
| 83 | L | A | 2.3783 | |
| 84 | S | A | 1.0769 | |
| 85 | A | A | 0.8894 | |
| 86 | P | A | 0.7975 | |
| 87 | L | A | 1.9917 | |
| 88 | V | A | 2.1171 | |
| 89 | H | A | 0.5762 | |
| 90 | S | A | 0.8133 | |
| 91 | V | A | 1.6618 | |
| 92 | A | A | 0.7620 | |
| 93 | A | A | 0.6859 | |
| 94 | A | A | 0.8353 | |
| 95 | P | A | 1.0135 | |
| 96 | V | A | 2.2556 | |
| 97 | V | A | 2.2269 | |
| 98 | H | A | 0.6395 | |
| 99 | S | A | 0.8603 | |
| 100 | V | A | 1.6659 | |
| 101 | A | A | 0.7641 | |
| 102 | A | A | 0.7132 | |
| 103 | A | A | 0.7915 | |
| 104 | P | A | 0.8043 | |
| 105 | V | A | 1.8719 | |
| 106 | Y | A | 1.4418 | |
| 107 | K | A | -0.3085 | |
| 108 | A | A | 0.3659 | |
| 109 | W | A | 0.9441 |