Chain sequence(s) |
A: QVQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGINPSNGGTNFNEKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:25) [INFO] Main: Simulation completed successfully. (00:02:26) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.4296 | |
2 | V | A | -0.7953 | |
3 | Q | A | -1.0754 | |
4 | L | A | 0.0000 | |
5 | V | A | -0.0735 | |
6 | Q | A | 0.0000 | |
7 | S | A | -0.3152 | |
8 | G | A | 0.2167 | |
9 | V | A | 1.7113 | |
10 | E | A | 0.7696 | |
11 | V | A | 1.2935 | |
12 | K | A | -0.6176 | |
13 | K | A | -1.7470 | |
14 | P | A | -1.6475 | |
15 | G | A | -1.4306 | |
16 | A | A | -1.4606 | |
17 | S | A | -1.8634 | |
18 | V | A | 0.0000 | |
19 | K | A | -2.2278 | |
20 | V | A | 0.0000 | |
21 | S | A | -0.6069 | |
22 | C | A | 0.0000 | |
23 | K | A | -1.2538 | |
24 | A | A | 0.0000 | |
25 | S | A | -0.9567 | |
26 | G | A | -0.9692 | |
27 | Y | A | -0.5267 | |
28 | T | A | -0.4271 | |
29 | F | A | 0.0000 | |
30 | T | A | -0.8697 | |
31 | N | A | -1.2101 | |
32 | Y | A | -0.4143 | |
33 | Y | A | -0.1518 | |
34 | M | A | 0.0000 | |
35 | Y | A | 0.0000 | |
36 | W | A | 0.0000 | |
37 | V | A | 0.0000 | |
38 | R | A | 0.0000 | |
39 | Q | A | -0.6482 | |
40 | A | A | -1.1040 | |
41 | P | A | -1.1815 | |
42 | G | A | -1.3484 | |
43 | Q | A | -1.7636 | |
44 | G | A | -1.0958 | |
45 | L | A | 0.0508 | |
46 | E | A | -0.1551 | |
47 | W | A | 0.4166 | |
48 | M | A | 0.0000 | |
49 | G | A | 0.0000 | |
50 | G | A | 0.0000 | |
51 | I | A | 0.0000 | |
52 | N | A | -0.9620 | |
53 | P | A | -1.0354 | |
54 | S | A | -1.2357 | |
55 | N | A | -1.7075 | |
56 | G | A | -1.2301 | |
57 | G | A | -1.0243 | |
58 | T | A | -0.6789 | |
59 | N | A | -1.1058 | |
60 | F | A | -1.5285 | |
61 | N | A | -2.1535 | |
62 | E | A | -3.6102 | |
63 | K | A | -3.2967 | |
64 | F | A | 0.0000 | |
65 | K | A | -3.6199 | |
66 | N | A | -3.0686 | |
67 | R | A | -2.5923 | |
68 | V | A | 0.0000 | |
69 | T | A | -1.2142 | |
70 | L | A | 0.0000 | |
71 | T | A | -0.3899 | |
72 | T | A | -0.8345 | |
73 | D | A | -1.1209 | |
74 | S | A | -0.7951 | |
75 | S | A | -0.6049 | |
76 | T | A | -0.7433 | |
77 | T | A | -0.8362 | |
78 | T | A | 0.0000 | |
79 | A | A | 0.0000 | |
80 | Y | A | -0.5389 | |
81 | M | A | 0.0000 | |
82 | E | A | -1.8441 | |
83 | L | A | 0.0000 | |
84 | K | A | -2.4769 | |
85 | S | A | -1.6414 | |
86 | L | A | 0.0000 | |
87 | Q | A | -1.5396 | |
88 | F | A | 0.0501 | |
89 | D | A | -1.2790 | |
90 | D | A | 0.0000 | |
91 | T | A | -0.1920 | |
92 | A | A | 0.0000 | |
93 | V | A | 0.4556 | |
94 | Y | A | 0.0000 | |
95 | Y | A | 0.2727 | |
96 | C | A | 0.0000 | |
97 | A | A | 0.0000 | |
98 | R | A | 0.0000 | |
99 | R | A | -0.1266 | |
100 | D | A | 0.0000 | |
101 | Y | A | 0.5614 | |
102 | R | A | -0.8055 | |
103 | F | A | 0.4238 | |
104 | D | A | -0.6731 | |
105 | M | A | 0.5247 | |
106 | G | A | 0.0000 | |
107 | F | A | 0.4324 | |
108 | D | A | 0.2162 | |
109 | Y | A | 0.3681 | |
110 | W | A | 0.3205 | |
111 | G | A | -0.3039 | |
112 | Q | A | -0.9150 | |
113 | G | A | -0.1449 | |
114 | T | A | 0.0000 | |
115 | T | A | 0.6679 | |
116 | V | A | 0.0000 | |
117 | T | A | 0.4298 | |
118 | V | A | 0.0000 | |
119 | S | A | -0.4405 | |
120 | S | A | -0.4108 |