| Chain sequence(s) |
B: MSLRALMDEMMKRAKEAFKIAEKMLEQNGATEEQKKKLKEKKKRIMELIK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:37)
[INFO] Main: Simulation completed successfully. (00:02:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 1.1387 | |
| 2 | S | B | 0.3917 | |
| 3 | L | B | 0.6404 | |
| 4 | R | B | -1.5862 | |
| 5 | A | B | -0.8332 | |
| 6 | L | B | -0.3361 | |
| 7 | M | B | -1.6313 | |
| 8 | D | B | -3.3570 | |
| 9 | E | B | -3.3287 | |
| 10 | M | B | -2.1798 | |
| 11 | M | B | -2.6789 | |
| 12 | K | B | -3.7145 | |
| 13 | R | B | -3.7549 | |
| 14 | A | B | -2.2553 | |
| 15 | K | B | -2.6357 | |
| 16 | E | B | -2.2342 | |
| 17 | A | B | -1.3244 | |
| 18 | F | B | 0.0000 | |
| 19 | K | B | -2.0549 | |
| 20 | I | B | 0.1070 | |
| 21 | A | B | -0.7492 | |
| 22 | E | B | -2.4597 | |
| 23 | K | B | -2.4750 | |
| 24 | M | B | -1.4304 | |
| 25 | L | B | -2.3005 | |
| 26 | E | B | -3.5365 | |
| 27 | Q | B | -3.0660 | |
| 28 | N | B | -2.7029 | |
| 29 | G | B | -2.1792 | |
| 30 | A | B | -2.5118 | |
| 31 | T | B | -2.8533 | |
| 32 | E | B | -4.0406 | |
| 33 | E | B | -4.3856 | |
| 34 | Q | B | -4.0606 | |
| 35 | K | B | -4.5404 | |
| 36 | K | B | -5.2013 | |
| 37 | K | B | -5.3548 | |
| 38 | L | B | -4.7557 | |
| 39 | K | B | -5.2877 | |
| 40 | E | B | -5.5538 | |
| 41 | K | B | -5.3479 | |
| 42 | K | B | -4.7106 | |
| 43 | K | B | -4.7654 | |
| 44 | R | B | -4.2821 | |
| 45 | I | B | -2.2009 | |
| 46 | M | B | -2.4162 | |
| 47 | E | B | -2.7327 | |
| 48 | L | B | -0.2586 | |
| 49 | I | B | -0.4245 | |
| 50 | K | B | -2.1659 |