Project name: Linker1

Status: done

Started: 2026-07-21 09:51:14
Settings
Chain sequence(s) A: GCGNLSTCLLGTYTQDAHKLQTYPRTNTGSGTPGGGGSLAEAKVLANRELDKYGVSDYYKNLINNAKTVEGVKALIDEILAALP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:10)
Show buried residues

Minimal score value
-3.3254
Maximal score value
2.6139
Average score
-0.9167
Total score value
-77.001

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3756
2 C A 0.1636
3 G A -0.5368
4 N A -0.6878
5 L A 0.8662
6 S A 0.4978
7 T A 0.8918
8 C A 1.8637
9 L A 2.6139
10 L A 2.4092
11 G A 1.1766
12 T A 0.5431
13 Y A 0.7630
14 T A -0.4578
15 Q A -2.0752
16 D A -2.6178
17 A A -1.6264
18 H A -2.5406
19 K A -2.6993
20 L A -0.7839
21 Q A -1.5796
22 T A -1.0581
23 Y A -0.6548
24 P A -1.2619
25 R A -2.2535
26 T A -1.8389
27 N A -2.0030
28 T A -1.3236
29 G A -1.0310
30 S A -0.8848
31 G A -0.9125
32 T A -0.7245
33 P A -0.8271
34 G A -1.1144
35 G A -1.0252
36 G A -1.0533
37 G A -1.0358
38 S A -0.5055
39 L A -0.4788
40 A A -0.4845
41 E A -0.3244
42 A A 0.0000
43 K A -1.1157
44 V A -0.2065
45 L A -0.5189
46 A A 0.0000
47 N A -2.1091
48 R A -2.4422
49 E A -2.2667
50 L A 0.0000
51 D A -3.3254
52 K A -2.6240
53 Y A -0.4738
54 G A -1.3935
55 V A -0.6804
56 S A -0.8903
57 D A -1.8377
58 Y A 0.0178
59 Y A -0.2921
60 K A -1.9219
61 N A -2.0571
62 L A -0.8643
63 I A 0.0000
64 N A -2.3492
65 N A -2.5465
66 A A -2.0771
67 K A -2.3067
68 T A -1.4016
69 V A -1.0440
70 E A -2.0697
71 G A -1.6864
72 V A 0.0000
73 K A -2.1625
74 A A -1.8406
75 L A -1.2707
76 I A 0.0000
77 D A -2.6834
78 E A -2.4834
79 I A 0.0000
80 L A -0.4945
81 A A -0.7289
82 A A -0.3715
83 L A 0.4778
84 P A 0.0272
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Laboratory of Theory of Biopolymers 2018